Thaps24954 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps24954 T332922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps24954 Sox 61 87
Thaps24954 Sox 90 149

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.468
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.497
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.458
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.432
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.655
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.453
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.641
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.641
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.455
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.587
MAM_05902 Metarhizium album MAM_05902 N 0.454
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.734
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.453
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.437
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.497
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.485
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.464
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.461
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.480