Lus10013219.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10013219.g T334562_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10013219 Sox 38 68
Lus10013219 Sox 63 92

Links

Other Sox family TFs
Other Linum usitatissimum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.620
CLEC004367 Cimex lectularius CLEC004367 N 0.467
Ca_10726 Cicer arietinum Ca_10726 N 0.597
Cla010647 Citrullus lanatus Cla010647 N 0.591
Pm010381 Prunus mume Pm010381 N 0.543
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.437
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.676
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.647
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.676
MDP0000699531 Malus domestica MDP0000699531 N 0.573
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.479
ASIS002444 Anopheles sinensis ASIS002444 N 0.439
D917_04157 Trichinella nativa D917_04157 N 0.448
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.450
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.441
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.461
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.477
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.507
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.487
sr12520 Sporisorium reilianum sr12520 N 0.422
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.430
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.522
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.604
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.613
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.604
OBART09G18880 Oryza barthii OBART09G18880 N 0.604
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.489
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.492
HelroG178674 Helobdella robusta HelroG178674 N 0.501
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.426
Bra012832 Brassica rapa Bra012832 N 0.688
Bo6g005800 Brassica oleracea Bo6g005800 N 0.485
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.604