OBART06G03050 (Oryza barthii)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 OBART06G03050 T350528_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G03050.1 Whirly 98 233

Links

Other Whirly family TFs
Other Oryza barthii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.728
Si006951m.g Setaria italica Si006951m.g N 0.926
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.735
TCM_011795 Theobroma cacao TCM_011795 N 0.721
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.904
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.897
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.750
Cla022217 Citrullus lanatus Cla022217 N 0.728
29736.m002027 Ricinus communis 29736.m002027 N 0.706
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.706
mgf002465m Mimulus guttatus mgf002465m N 0.750
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.743
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.757
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.750
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.919
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.721
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.750
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.706
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.721
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.735
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.735
MDP0000268451 Malus domestica MDP0000268451 N 0.713
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.706
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.926
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.912
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.750
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.735
PK22670.1 Cannabis sativa PK22670.1 N 0.721
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.757
WHY1 Arabidopsis thaliana AT1G14410 N 0.721
WHY3 Arabidopsis thaliana AT2G02740 N 0.743
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.993
Bo7g080560 Brassica oleracea Bo7g080560 N 0.728
Bo8g066030 Brassica oleracea Bo8g066030 N 0.721
Bra016702 Brassica rapa Bra016702 N 0.721
Bra024809 Brassica rapa Bra024809 N 0.735
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.926
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.713
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.743
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.757
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.765
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.906
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.706
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.993
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.897
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.993
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.985
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.993
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.993
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 1.000
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.993
OS06G0145800 Oryza sativa OS06G0145800 N 0.993
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.728
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.735
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.728