CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc05g050340.2
(
Solanum lycopersicum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Solyc05g050340.2
T354786_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc05g050340.2.1
WRKY
129
186
EDGLSWRKYGQKVISGSKYPREYYRCARRCCGATKMVQRIETGPLTFEITYGGSHSCG
Links
Other
WRKY
family TFs
Other
Solanum lycopersicum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB27
Arabidopsis thaliana
AT3G53200
D
WER
Arabidopsis thaliana
AT5G14750
D
MYB24
Arabidopsis thaliana
AT5G40350
D
MYB59
Arabidopsis thaliana
AT5G59780
D
MYB21
Arabidopsis thaliana
AT3G27810
I
ATMYB48
Arabidopsis thaliana
AT3G46130
I
MYB86
Arabidopsis thaliana
AT5G26660
I
TT2
Arabidopsis thaliana
AT5G35550
I
BRADI1G45510
Brachypodium distachyon
BRADI1G45510
I
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
GLYMA11G15180
Glycine max
GLYMA11G15180
I
GLYMA12G07110
Glycine max
GLYMA12G07110
I
GLYMA13G40830
Glycine max
GLYMA13G40830
I
GLYMA15G04620
Glycine max
GLYMA15G04620
I
GRMZM2G001223
Zea mays
GRMZM2G001223
I
GRMZM2G048136
Zea mays
GRMZM2G048136
I
GRMZM2G106558
Zea mays
GRMZM2G106558
I
GRMZM2G130149
Zea mays
GRMZM2G130149
I
GRMZM2G305856
Zea mays
GRMZM2G305856
I
MLOC_16981
Hordeum vulgare
MLOC_16981
I
MLOC_17928
Hordeum vulgare
MLOC_17928
I
MLOC_52439
Hordeum vulgare
MLOC_52439
I
MLOC_78504
Hordeum vulgare
MLOC_78504
I
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
ORUFI09G18880
Oryza rufipogon
ORUFI09G18880
I
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
PRUPE_ppa008906mg
Prunus persica
PRUPE_ppa008906mg
I
Sb08g018580
Sorghum bicolor
Sb08g018580
I
Si023104m.g
Setaria italica
Si023104m.g
I
Si026803m.g
Setaria italica
Si026803m.g
I
TCM_005371
Theobroma cacao
TCM_005371
I
TCM_021433
Theobroma cacao
TCM_021433
I
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
Cagra.1390s0010
Capsella grandiflora
Cagra.1390s0010
I
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
Gorai.004G064100
Gossypium raimondii
Gorai.004G064100
I
Gorai.013G139200
Gossypium raimondii
Gorai.013G139200
I
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
Pavir.Fa00877
Panicum virgatum
Pavir.Fa00877
I
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
SapurV1A.1387s0090
Salix purpurea
SapurV1A.1387s0090
I
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
BGIOSGA027658
Oryza indica
BGIOSGA027658
N
BGIOSGA037085
Oryza indica
BGIOSGA037085
N
Bo3g017760
Brassica oleracea
Bo3g017760
N
Bra009910
Brassica rapa
Bra009910
N
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
F775_22650
Aegilops tauschii
F775_22650
N
fgenesh2_kg.397__1__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.397__1__AT3G24310.1
N
OBART01G27550
Oryza barthii
OBART01G27550
N
OBART12G16130
Oryza barthii
OBART12G16130
N
OGLUM12G17720
Oryza glumaepatula
OGLUM12G17720
N
OS01G0975300
Oryza sativa
OS01G0975300
N
PGSC0003DMG400030397
Solanum tuberosum
PGSC0003DMG400030397
N
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
PGSC0003DMG402010883
Solanum tuberosum
PGSC0003DMG402010883
N
Sb05g027370
Sorghum bicolor
Sb05g027370
N
Si003873m.g
Setaria italica
Si003873m.g
N
Solyc06g005310.2
Solanum lycopersicum
Solyc06g005310.2
N
Solyc06g075660.2
Solanum lycopersicum
Solyc06g075660.2
N
Traes_1BS_060C24872
Triticum aestivum
Traes_1BS_060C24872
N
Traes_2BL_DAA2104F5
Triticum aestivum
Traes_2BL_DAA2104F5
N
Traes_2DL_77F235694
Triticum aestivum
Traes_2DL_77F235694
N
Traes_5AS_7D519210E
Triticum aestivum
Traes_5AS_7D519210E
N
Traes_5AS_D9A4C1AB0
Triticum aestivum
Traes_5AS_D9A4C1AB0
N
Traes_5BS_D1C03C165
Triticum aestivum
Traes_5BS_D1C03C165
N
Traes_5DS_1EF547639
Triticum aestivum
Traes_5DS_1EF547639
N
TRIUR3_12300
Triticum urartu
TRIUR3_12300
N
TRIUR3_32110
Triticum urartu
TRIUR3_32110
N
Ca_11427
Cicer arietinum
Ca_11427
N
Ca_16710
Cicer arietinum
Ca_16710
N
30072.m000986
Ricinus communis
30072.m000986
N
30147.m013749
Ricinus communis
30147.m013749
N
cassava11833.valid.m1
Manihot esculenta
cassava11833.valid.m1
N
cassava13590.valid.m1
Manihot esculenta
cassava13590.valid.m1
N
cassava29437.valid.m1
Manihot esculenta
cassava29437.valid.m1
N
mgf001247m
Mimulus guttatus
mgf001247m
N
mgf009707m
Mimulus guttatus
mgf009707m
N
mgf018110m
Mimulus guttatus
mgf018110m
N
mgf021749m
Mimulus guttatus
mgf021749m
N
Aquca_027_00267
Aquilegia coerulea
Aquca_027_00267
N
Bostr.26833s0259
Boechera stricta
Bostr.26833s0259
N
Cagra.1317s0038
Capsella grandiflora
Cagra.1317s0038
N
Carubv10027237m.g
Capsella rubella
Carubv10027237m.g
N
Ciclev10006469m.g
Citrus clementina
Ciclev10006469m.g
N
Ciclev10029019m.g
Citrus clementina
Ciclev10029019m.g
N
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
evm.TU.contig_33658
Carica papaya
evm.TU.contig_33658
N
evm.TU.supercontig_87.85
Carica papaya
evm.TU.supercontig_87.85
N
gene13970-v1.0-hybrid
Fragaria vesca
gene13970-v1.0-hybrid
N
Lus10040861.g
Linum usitatissimum
Lus10040861.g
N
MDP0000139931
Malus domestica
MDP0000139931
N
MDP0000169874
Malus domestica
MDP0000169874
N
MDP0000475808
Malus domestica
MDP0000475808
N
MDP0000581761
Malus domestica
MDP0000581761
N
Pavir.Gb01276
Panicum virgatum
Pavir.Gb01276
N
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
Pavir.J23620
Panicum virgatum
Pavir.J23620
N
Pavir.J24653
Panicum virgatum
Pavir.J24653
N
Thhalv10022197m.g
Eutrema salsugineum
Thhalv10022197m.g
N
PK16488.1
Cannabis sativa
PK16488.1
N
PK22178.1
Cannabis sativa
PK22178.1
N
PK27824.1
Cannabis sativa
PK27824.1
N
LjT39N06.160.nd
Lotus japonicus
LjT39N06.160.nd
N
PDK_20s1354851g002
Phoenix dactylifera
PDK_20s1354851g002
N
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
PDK_20s1528141g001
Phoenix dactylifera
PDK_20s1528141g001
N