POPTR_0006s10510 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0006s10510 T004653_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.691 0.736
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.685 0.698
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.680 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s10510.1 AP2 67 126

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002292 Ricinus communis 29729.m002292 I 0.683
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.680
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.680
Bo9g155940 Brassica oleracea Bo9g155940 I 0.685
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.685
Bra002159 Brassica rapa Bra002159 I 0.685
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.683
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.683
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.681
Cla006713 Citrullus lanatus Cla006713 I 0.692
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.684
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.693
DREB2G Arabidopsis thaliana AT5G18450 D 0.685
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.686
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.692
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.709
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.684
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.679
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.695
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.689
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.705
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.682
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.695
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.694
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.685
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.685
mgf017629m Mimulus guttatus mgf017629m I 0.688
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.709
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.681
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.714
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.701
PK07402.1 Cannabis sativa PK07402.1 D 0.691
PK07829.1 Cannabis sativa PK07829.1 I 0.684
PK08602.1 Cannabis sativa PK08602.1 D 0.680
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.681
POPTR_0016s13380 Populus trichocarpa POPTR_0016s13380 I 0.683
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.733
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.693
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.679
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.677
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.679
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.677
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.685
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.680
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.677
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.677
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.680
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.701
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.685
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.687