Gorai.006G025100 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.006G025100 T008556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G025100.1 AP2 64 121
Gorai.006G025100.1 AP2 163 215

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003477 Ricinus communis 29822.m003477 N 0.884
30069.m000440 Ricinus communis 30069.m000440 N 0.854
30114.m000507 Ricinus communis 30114.m000507 N 0.809
ADAP Arabidopsis thaliana AT1G16060 I 0.793
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.804
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.820
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.834
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.845
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.781
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.800
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.816
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.813
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.803
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.681
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.763
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.824
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.796
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.823
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.812
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.812
Bo5g021520 Brassica oleracea Bo5g021520 N 0.806
Bo6g067950 Brassica oleracea Bo6g067950 I 0.816
Bo6g124080 Brassica oleracea Bo6g124080 N 0.823
Bo8g083590 Brassica oleracea Bo8g083590 I 0.816
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.816
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.810
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.804
Bra003178 Brassica rapa Bra003178 N 0.853
Bra007066 Brassica rapa Bra007066 N 0.853
Bra026082 Brassica rapa Bra026082 I 0.795
Bra035137 Brassica rapa Bra035137 I 0.815
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.802
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.829
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.787
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.815
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.771
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.816
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.798
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.766
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.795
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.816
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.812
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.875
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.860
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.822
Ca_03306 Cicer arietinum Ca_03306 N 0.792
Ca_10533 Cicer arietinum Ca_10533 N 0.878
Ca_17532 Cicer arietinum Ca_17532 N 0.857
Ca_20689 Cicer arietinum Ca_20689 N 0.893
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.868
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.859
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.827
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.850
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.827
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.836
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.807
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.827
Cla015555 Citrullus lanatus Cla015555 N 0.826
Cla017294 Citrullus lanatus Cla017294 N 0.769
Cla019044 Citrullus lanatus Cla019044 N 0.831
Cla020765 Citrullus lanatus Cla020765 N 0.843
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.823
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.820
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.803
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.782
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.804
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.818
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.818
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.773
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.836
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.825
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.895
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.817
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.857
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.765
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.824
F775_02064 Aegilops tauschii F775_02064 N 0.776
F775_02400 Aegilops tauschii F775_02400 I 0.802
F775_06373 Aegilops tauschii F775_06373 N 0.796
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.809
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.842
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.819
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.829
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.827
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.805
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.826
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.827
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.813
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.857
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.830
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.835
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.816
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.827
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.805
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.838
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.814
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.909
Gorai.006G025200 Gossypium raimondii Gorai.006G025200 N 0.691
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.843
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.800
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.829
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.813
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.875
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.817
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.780
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.824
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.803
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.847
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.793
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.823
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.796
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.708
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.819
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.716
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.824
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.770
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.731
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.707
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.803
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.840
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.831
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.799
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.827
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.842
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.817
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.825
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.803
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.813
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.842
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.818
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.819
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.819
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.803
MDP0000133423 Malus domestica MDP0000133423 N 0.827
MDP0000166059 Malus domestica MDP0000166059 N 0.751
MDP0000186581 Malus domestica MDP0000186581 N 0.817
MDP0000206674 Malus domestica MDP0000206674 N 0.805
MDP0000231748 Malus domestica MDP0000231748 N 0.829
MDP0000281784 Malus domestica MDP0000281784 I 0.818
MDP0000297698 Malus domestica MDP0000297698 N 0.817
MDP0000318457 Malus domestica MDP0000318457 N 0.827
mg013664m Mimulus guttatus mg013664m N 0.912
mgf008907m Mimulus guttatus mgf008907m I 0.769
mgf017413m Mimulus guttatus mgf017413m N 0.798
mgf019116m Mimulus guttatus mgf019116m N 0.780
mgf019814m Mimulus guttatus mgf019814m N 0.910
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.827
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.857
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.782
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.889
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.856
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.829
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.832
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.863
OB01G43640 Oryza brachyantha OB01G43640 N 0.712
OB05G31600 Oryza brachyantha OB05G31600 I 0.797
OB08G23780 Oryza brachyantha OB08G23780 N 0.723
OB09G17420 Oryza brachyantha OB09G17420 I 0.823
OB11G11380 Oryza brachyantha OB11G11380 I 0.772
OB12G11690 Oryza brachyantha OB12G11690 I 0.772
OBART01G34800 Oryza barthii OBART01G34800 N 0.681
OBART06G03040 Oryza barthii OBART06G03040 N 0.824
OBART09G10730 Oryza barthii OBART09G10730 N 0.831
OBART12G01740 Oryza barthii OBART12G01740 N 0.798
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.681
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.840
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.831
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.713
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.831
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.763
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.803
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.791
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.840
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.831
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.812
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.812
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.681
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.812
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.824
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.840
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.823
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.812
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.763
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.834
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.818
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.812
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.812
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.807
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.850
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.836
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.799
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.681
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.824
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.796
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.823
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.772
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.812
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.681
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.824
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.840
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.831
OS05G0536250 Oryza sativa OS05G0536250 I 0.763
OS06G0145700 Oryza sativa OS06G0145700 N 0.799
OS08G0442400 Oryza sativa OS08G0442400 I 0.796
OS09G0423800 Oryza sativa OS09G0423800 I 0.823
OS12G0126300 Oryza sativa OS12G0126300 I 0.772
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.815
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.803
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.712
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.824
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.803
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.712
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.795
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.816
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.799
PK04008.1 Cannabis sativa PK04008.1 I 0.807
PK24809.1 Cannabis sativa PK24809.1 I 0.815
PK26651.1 Cannabis sativa PK26651.1 I 0.811
Pm006561 Prunus mume Pm006561 N 0.849
Pm008629 Prunus mume Pm008629 I 0.817
Pm013856 Prunus mume Pm013856 N 0.831
Pm015843 Prunus mume Pm015843 N 0.846
Pm015847 Prunus mume Pm015847 N 0.854
Pm017032 Prunus mume Pm017032 N 0.852
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.818
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.806
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.764
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.851
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.805
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.884
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.827
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.831
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.849
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.854
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.817
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.884
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.777
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.779
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.817
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.818
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.818
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.823
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.695
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.832
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.775
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.803
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.824
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.751
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.809
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.793
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.862
Si007857m.g Setaria italica Si007857m.g N 0.827
Si012026m.g Setaria italica Si012026m.g N 0.849
Si013842m.g Setaria italica Si013842m.g N 0.770
Si022186m.g Setaria italica Si022186m.g I 0.803
Si026433m.g Setaria italica Si026433m.g N 0.849
Si030129m.g Setaria italica Si030129m.g I 0.823
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.752
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.809
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.816
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.774
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.799
TCM_011797 Theobroma cacao TCM_011797 N 0.841
TCM_018386 Theobroma cacao TCM_018386 N 0.843
TCM_027569 Theobroma cacao TCM_027569 I 0.817
TCM_038442 Theobroma cacao TCM_038442 N 0.827
TCM_044588 Theobroma cacao TCM_044588 I 0.813
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.792
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.853
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.776
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.766
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.798
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.775
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.815
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.775
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.827
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.802
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.702
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.807
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.869
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.817
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.816
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.882
WRI1 Arabidopsis thaliana AT3G54320 I 0.816
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.853
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.755