OPUNC06G19340 (Oryza punctata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 OPUNC06G19340 T015357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.534 0.667
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.439 0.580
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC06G19340.1 ARID/BRIGHT 169 258
OPUNC06G19340.2 ARID/BRIGHT 169 258

Links

Other ARID/BRIGHT family TFs
Other Oryza punctata TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004641 Ricinus communis 29929.m004641 I
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I
Bo2g062840 Brassica oleracea Bo2g062840 I
Bo7g065290 Brassica oleracea Bo7g065290 N
Bo9g058970 Brassica oleracea Bo9g058970 N
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N
Bra027478 Brassica rapa Bra027478 N
Bra033671 Brassica rapa Bra033671 N
Bra038324 Brassica rapa Bra038324 I
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N
Carubv10020369m.g Capsella rubella Carubv10020369m.g I
Carubv10026434m.g Capsella rubella Carubv10026434m.g N
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N
Ca_11356 Cicer arietinum Ca_11356 I
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I
GLYMA11G36980 Glycine max GLYMA11G36980 N
GLYMA18G00903 Glycine max GLYMA18G00903 N
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N
GRMZM2G126827 Zea mays GRMZM2G126827 N
GRMZM2G156621 Zea mays GRMZM2G156621 N
GRMZM2G163813 Zea mays GRMZM2G163813 N
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N
Lus10006411.g Linum usitatissimum Lus10006411.g I
MDP0000155354 Malus domestica MDP0000155354 N
mgf010397m Mimulus guttatus mgf010397m N
mgf019346m Mimulus guttatus mgf019346m I
MLOC_62426 Hordeum vulgare MLOC_62426 N
MTR_3g085180 Medicago truncatula MTR_3g085180 N
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N
Pavir.J20730 Panicum virgatum Pavir.J20730 N
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N
PK16953.1 Cannabis sativa PK16953.1 N
Pm007020 Prunus mume Pm007020 N
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I
Sb04g004940 Sorghum bicolor Sb04g004940 N
Si017749m.g Setaria italica Si017749m.g N
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N
SPL2 Arabidopsis thaliana AT5G43270 N
SPL2 Arabidopsis lyrata scaffold_800740.1 N
SPL2 Vitis vinifera VIT_11s0065g00170 N
TCM_008772 Theobroma cacao TCM_008772 N
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I