BHLHE40 (Monodelphis domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMODG00000004516 T035480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000005572 bHLH 54 108

Links

Other bHLH family TFs
Other Monodelphis domestica TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30138.m004071 Ricinus communis 30138.m004071 I 0.000
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
BGIOSGA001434 Oryza indica BGIOSGA001434 N 0.000
BGIOSGA005630 Oryza indica BGIOSGA005630 I 0.000
BGIOSGA022580 Oryza indica BGIOSGA022580 I 0.000
Bostr.3288s0094 Boechera stricta Bostr.3288s0094 I 0.000
BRADI1G45170 Brachypodium distachyon BRADI1G45170 N 0.000
BRADI2G40920 Brachypodium distachyon BRADI2G40920 N 0.000
BRADI3G59410 Brachypodium distachyon BRADI3G59410 N 0.000
Cagra.0402s0077 Capsella grandiflora Cagra.0402s0077 I 0.000
Carubv10021541m.g Capsella rubella Carubv10021541m.g I 0.000
cassava35166.m1 Manihot esculenta cassava35166.m1 I 0.000
Ca_13151 Cicer arietinum Ca_13151 I 0.000
chr4.CM0087.990.nc Lotus japonicus chr4.CM0087.990.nc I 0.000
Cla019404 Citrullus lanatus Cla019404 I 0.000
F775_00225 Aegilops tauschii F775_00225 I 0.000
F775_03178 Aegilops tauschii F775_03178 N 0.000
F775_07483 Aegilops tauschii F775_07483 I 0.000
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I 0.000
fgenesh1_pg.scaffold_823000001 Physcomitrella patens fgenesh1_pg.scaffold_823000001 N 0.000
fgenesh2_kg.1__2057__AT1G18790.1 Arabidopsis lyrata fgenesh2_kg.1__2057__AT1G18790.1 I 0.000
gene26015-v1.0-hybrid Fragaria vesca gene26015-v1.0-hybrid I 0.000
Genemark1.7281_g Coccomyxa subellipsoidea C169 Genemark1.7281_g I 0.000
GLYMA04G33516 Glycine max GLYMA04G33516 I 0.000
GLYMA06G20881 Glycine max GLYMA06G20881 I 0.000
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I 0.000
GRMZM2G105641 Zea mays GRMZM2G105641 N 0.000
GRMZM2G392306 Zea mays GRMZM2G392306 I 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
LPERR01G16660 Leersia perrieri LPERR01G16660 N 0.000
LPERR02G26470 Leersia perrieri LPERR02G26470 N 0.000
LPERR06G07570 Leersia perrieri LPERR06G07570 I 0.000
Lus10035008.g Linum usitatissimum Lus10035008.g I 0.000
MDP0000261199 Malus domestica MDP0000261199 I 0.000
MDP0000266172 Malus domestica MDP0000266172 I 0.000
mg020279m Mimulus guttatus mg020279m I 0.000
mgf022310m Mimulus guttatus mgf022310m I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.000
MTR_0140s0010 Medicago truncatula MTR_0140s0010 I 0.000
MTR_3g435550 Medicago truncatula MTR_3g435550 I 0.000
OB02G39310 Oryza brachyantha OB02G39310 I 0.000
OB06G17750 Oryza brachyantha OB06G17750 I 0.000
OBART01G19230 Oryza barthii OBART01G19230 N 0.000
OBART02G32320 Oryza barthii OBART02G32320 I 0.000
OGLUM01G22860 Oryza glumaepatula OGLUM01G22860 N 0.000
OGLUM02G32960 Oryza glumaepatula OGLUM02G32960 I 0.000
OLONG_016325 Oryza longistaminata OLONG_016325 I 0.000
OMERI02G30990 Oryza meridionalis OMERI02G30990 I 0.000
OMERI06G09770 Oryza meridionalis OMERI06G09770 I 0.000
ONIVA01G21910 Oryza nivara ONIVA01G21910 N 0.000
ONIVA06G04700 Oryza nivara ONIVA06G04700 I 0.000
ONIVA06G09450 Oryza nivara ONIVA06G09450 I 0.000
OPUNC01G19590 Oryza punctata OPUNC01G19590 N 0.000
OPUNC02G29870 Oryza punctata OPUNC02G29870 I 0.000
OPUNC06G07940 Oryza punctata OPUNC06G07940 I 0.000
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.000
ORGLA02G0278600 Oryza glaberrima ORGLA02G0278600 I 0.000
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I 0.000
ORUFI01G21630 Oryza rufipogon ORUFI01G21630 N 0.000
ORUFI02G34010 Oryza rufipogon ORUFI02G34010 I 0.000
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I 0.000
OS06G0228950 Oryza sativa OS06G0228950 I 0.000
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I 0.000
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I 0.000
Pavir.Ea01492 Panicum virgatum Pavir.Ea01492 N 0.000
Pavir.Eb01347 Panicum virgatum Pavir.Eb01347 N 0.000
Pavir.J13146 Panicum virgatum Pavir.J13146 I 0.000
Pavir.J14787 Panicum virgatum Pavir.J14787 N 0.000
Pavir.J17077 Panicum virgatum Pavir.J17077 N 0.000
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I 0.000
Pm024905 Prunus mume Pm024905 I 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
PRUPE_ppa023107mg Prunus persica PRUPE_ppa023107mg I 0.000
RKD1 Arabidopsis thaliana AT1G18790 I 0.000
RKD2 Arabidopsis thaliana AT1G74480 D 0.000
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.000
Sb04g028040 Sorghum bicolor Sb04g028040 N 0.000
Sb10g008120 Sorghum bicolor Sb10g008120 I 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.000
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.000
Si005102m.g Setaria italica Si005102m.g N 0.000
Si008273m.g Setaria italica Si008273m.g I 0.000
Si019159m.g Setaria italica Si019159m.g N 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.000
Traes_6BL_301505440 Triticum aestivum Traes_6BL_301505440 I 0.000
Traes_6DL_8ECBBC867 Triticum aestivum Traes_6DL_8ECBBC867 I 0.000
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
VIT_17s0000g06250 Vitis vinifera VIT_17s0000g06250 I 0.000