TCFL5 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000023366 T037072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcfl5
M01744_2.00 		Mus musculus
NBCDCGHGVN
NBCDCGHGVN		 PBM
Weirauch et al.(2014)
pTH4576 		0.914 1.000
TCFL5
M04074_2.00 		Homo sapiens
KCRCGCGCHC
GDGCGCGYGM		 SELEX
Yin et al.(2017)
TCFL5_eDBD_HT-SELEX 		0.914 1.000
TCFL5
M04075_2.00 		Homo sapiens
BCRCGCGCMC
GKGCGCGYGV		 SELEX
Yin et al.(2017)
TCFL5_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000041495 bHLH 402 452

Links

Other bHLH family TFs
Other Pan troglodytes TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo00902s070 Brassica oleracea Bo00902s070 N
Bo1g051270 Brassica oleracea Bo1g051270 N
Bo7g111950 Brassica oleracea Bo7g111950 N
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N
Bostr.7903s0074 Boechera stricta Bostr.7903s0074 N
Bra024219 Brassica rapa Bra024219 N
Bra026276 Brassica rapa Bra026276 N
Bra036504 Brassica rapa Bra036504 N
Cagra.20132s0010 Capsella grandiflora Cagra.20132s0010 N
Carubv10005638m.g Capsella rubella Carubv10005638m.g N
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N
Ca_19014 Cicer arietinum Ca_19014 N
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N
GLYMA06G45180 Glycine max GLYMA06G45180 N
GLYMA12G11800 Glycine max GLYMA12G11800 N
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N
MDP0000237588 Malus domestica MDP0000237588 N
MDP0000315130 Malus domestica MDP0000315130 N
MTR_2g090080 Medicago truncatula MTR_2g090080 N
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N
Pm015354 Prunus mume Pm015354 N
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N
TCM_007971 Theobroma cacao TCM_007971 N
Thhalv10002089m.g Eutrema salsugineum Thhalv10002089m.g N
ULT1 Arabidopsis thaliana AT4G28190 N
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N
ULT2 Arabidopsis thaliana AT2G20825 N
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N