orange1.1g022288m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g022288m.g T050565_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.903 0.882
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022288m bHLH 18 68

Links

Other bHLH family TFs
Other Citrus sinensis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.000
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.000
F775_08186 Aegilops tauschii F775_08186 N 0.000
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.000
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.000
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.000
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.000
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.000
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.000
Traes_5DL_8FD0CF6B9 Triticum aestivum Traes_5DL_8FD0CF6B9 N 0.000
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.000