CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000011034
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000011034
T113888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000011059
C2H2 ZF
218
240
YRCRMCAATFFSKSDMQIHSKSH
ENSXMAP00000011059
C2H2 ZF
246
268
HKCPHCAKSFANSSYLAQHIRIH
ENSXMAP00000011059
C2H2 ZF
274
296
YTCSYCQKSFRQLSHLQQHTRNH
ENSXMAP00000011059
C2H2 ZF
302
324
HKCLHCTKSFANSSYLAQHVRIH
ENSXMAP00000011059
C2H2 ZF
330
352
YSCSYCDKCFRQLSHLQQHSRIH
ENSXMAP00000011059
C2H2 ZF
358
382
YKCTHPGCEKSFTQLSNLQSHRRQH
ENSXMAP00000011059
C2H2 ZF
388
410
YKCPNCNKGYIDAASLEVHMSTH
ENSXMAP00000011059
C2H2 ZF
418
440
YSCGLCNRSYTSETYLVKHMEKH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29841.m002855
Ricinus communis
29841.m002855
N
0.000
AMTR_s00004p00169140
Amborella trichopoda
AMTR_s00004p00169140
N
0.000
Aquca_020_00103
Aquilegia coerulea
Aquca_020_00103
N
0.000
Bo8g066360
Brassica oleracea
Bo8g066360
N
0.000
Bostr.7128s0147
Boechera stricta
Bostr.7128s0147
N
0.000
Bra016665
Brassica rapa
Bra016665
N
0.000
Cagra.2238s0088
Capsella grandiflora
Cagra.2238s0088
N
0.000
Carubv10009517m.g
Capsella rubella
Carubv10009517m.g
N
0.000
cassava13512.valid.m1
Manihot esculenta
cassava13512.valid.m1
N
0.000
cassava13513.valid.m1
Manihot esculenta
cassava13513.valid.m1
N
0.000
cassava5958.m1
Manihot esculenta
cassava5958.m1
N
0.000
cassava6704.valid.m1
Manihot esculenta
cassava6704.valid.m1
N
0.000
Ca_06682
Cicer arietinum
Ca_06682
N
0.000
Ca_19192
Cicer arietinum
Ca_19192
N
0.000
chr3.CM0142.530.nd
Lotus japonicus
chr3.CM0142.530.nd
N
0.000
chr4.CM0234.40.nc
Lotus japonicus
chr4.CM0234.40.nc
N
0.000
Ciclev10010753m.g
Citrus clementina
Ciclev10010753m.g
N
0.000
Ciclev10025929m.g
Citrus clementina
Ciclev10025929m.g
N
0.000
Cla012920
Citrullus lanatus
Cla012920
N
0.000
Cla016961
Citrullus lanatus
Cla016961
N
0.000
Cucsa.096390
Cucumis sativus
Cucsa.096390
N
0.000
Cucsa.105420
Cucumis sativus
Cucsa.105420
N
0.000
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.000
gene31058-v1.0-hybrid
Fragaria vesca
gene31058-v1.0-hybrid
N
0.000
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.000
GLYMA06G25310
Glycine max
GLYMA06G25310
N
0.000
GLYMA06G30350
Glycine max
GLYMA06G30350
N
0.000
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.000
GLYMA13G44230
Glycine max
GLYMA13G44230
N
0.000
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.000
Gorai.006G101100
Gossypium raimondii
Gorai.006G101100
N
0.000
Gorai.009G016600
Gossypium raimondii
Gorai.009G016600
N
0.000
Gorai.010G062800
Gossypium raimondii
Gorai.010G062800
N
0.000
Gorai.011G083900
Gossypium raimondii
Gorai.011G083900
N
0.000
Lus10002168.g
Linum usitatissimum
Lus10002168.g
N
0.000
Lus10019406.g
Linum usitatissimum
Lus10019406.g
N
0.000
Lus10030108.g
Linum usitatissimum
Lus10030108.g
N
0.000
MBD10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001305
N
0.000
MBD10
Arabidopsis thaliana
AT1G15340
N
0.000
MDP0000152128
Malus domestica
MDP0000152128
N
0.000
MDP0000248422
Malus domestica
MDP0000248422
N
0.000
MDP0000375866
Malus domestica
MDP0000375866
N
0.000
MDP0000574053
Malus domestica
MDP0000574053
N
0.000
MTR_0339s0020
Medicago truncatula
MTR_0339s0020
N
0.000
MTR_4g114770
Medicago truncatula
MTR_4g114770
N
0.000
MTR_4g114785
Medicago truncatula
MTR_4g114785
N
0.000
orange1.1g022412m.g
Citrus sinensis
orange1.1g022412m.g
N
0.000
orange1.1g022816m.g
Citrus sinensis
orange1.1g022816m.g
N
0.000
PGSC0003DMG400002913
Solanum tuberosum
PGSC0003DMG400002913
N
0.000
PK04144.1
Cannabis sativa
PK04144.1
N
0.000
PK24888.1
Cannabis sativa
PK24888.1
N
0.000
Pm027560
Prunus mume
Pm027560
N
0.000
POPTR_0018s12980
Populus trichocarpa
POPTR_0018s12980
N
0.000
PRUPE_ppa008789mg
Prunus persica
PRUPE_ppa008789mg
N
0.000
PRUPE_ppa009989mg
Prunus persica
PRUPE_ppa009989mg
N
0.000
SapurV1A.0034s0480
Salix purpurea
SapurV1A.0034s0480
N
0.000
SapurV1A.1100s0070
Salix purpurea
SapurV1A.1100s0070
N
0.000
Solyc07g008170.2
Solanum lycopersicum
Solyc07g008170.2
N
0.000
Solyc12g009590.1
Solanum lycopersicum
Solyc12g009590.1
N
0.000
TCM_027169
Theobroma cacao
TCM_027169
N
0.000
TCM_038107
Theobroma cacao
TCM_038107
N
0.000
Thhalv10007967m.g
Eutrema salsugineum
Thhalv10007967m.g
N
0.000
VIT_09s0002g06870
Vitis vinifera
VIT_09s0002g06870
N
0.000
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.000