ovo (Drosophila virilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0064309 T114616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.827 1.000
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.827 1.000
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.827 1.000
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.827 1.000
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.827 1.000
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.827 1.000
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.827 1.000
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.827 1.000
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.790 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0230208 C2H2 ZF 1456 1478
FBpp0230208 C2H2 ZF 1484 1506
FBpp0230208 C2H2 ZF 1512 1535

Links

Other C2H2 ZF family TFs
Other Drosophila virilis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30116.m000393 Ricinus communis 30116.m000393 N
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N
BGIOSGA009119 Oryza indica BGIOSGA009119 N
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N
Cla002005 Citrullus lanatus Cla002005 N
Cucsa.239250 Cucumis sativus Cucsa.239250 N
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N
F775_20121 Aegilops tauschii F775_20121 N
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N
LPERR02G27910 Leersia perrieri LPERR02G27910 N
MDP0000597087 Malus domestica MDP0000597087 N
MDP0000634922 Malus domestica MDP0000634922 N
mgf000387m Mimulus guttatus mgf000387m N
mgf013454m Mimulus guttatus mgf013454m N
MLOC_54605 Hordeum vulgare MLOC_54605 N
OB02G40920 Oryza brachyantha OB02G40920 N
OB07G29110 Oryza brachyantha OB07G29110 N
OBART02G34050 Oryza barthii OBART02G34050 N
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I
OLONG_015646 Oryza longistaminata OLONG_015646 N
OMERI02G32400 Oryza meridionalis OMERI02G32400 I
ONIVA02G36110 Oryza nivara ONIVA02G36110 I
OPUNC02G31450 Oryza punctata OPUNC02G31450 N
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I
OS02G0770600 Oryza sativa OS02G0770600 N
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N
Pavir.J01310 Panicum virgatum Pavir.J01310 N
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N
PK04394.1 Cannabis sativa PK04394.1 N
PK16821.1 Cannabis sativa PK16821.1 N
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N
Si017699m.g Setaria italica Si017699m.g N
TCM_006422 Theobroma cacao TCM_006422 N
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N
TRIUR3_20834 Triticum urartu TRIUR3_20834 N
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N