OGLUM03G03870 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM03G03870 T124715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G03870.1 C2H2 ZF 1379 1402
OGLUM03G03870.1 C2H2 ZF 1403 1426
OGLUM03G03870.1 C2H2 ZF 1432 1456
OGLUM03G03870.1 C2H2 ZF 1462 1488

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30078.m002307 Ricinus communis 30078.m002307 N
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N
Bo4g186560 Brassica oleracea Bo4g186560 N
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N
Bra017213 Brassica rapa Bra017213 N
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N
Carubv10022939m.g Capsella rubella Carubv10022939m.g N
cassava35219.m1 Manihot esculenta cassava35219.m1 N
Ca_12052 Cicer arietinum Ca_12052 N
Ca_17153 Cicer arietinum Ca_17153 N
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N
Cucsa.124610 Cucumis sativus Cucsa.124610 N
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N
GLYMA03G33970 Glycine max GLYMA03G33970 N
GLYMA05G22730 Glycine max GLYMA05G22730 N
GLYMA10G06500 Glycine max GLYMA10G06500 N
GLYMA13G20700 Glycine max GLYMA13G20700 N
GLYMA19G36710 Glycine max GLYMA19G36710 N
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N
mgf007606m Mimulus guttatus mgf007606m N
MTR_1g063850 Medicago truncatula MTR_1g063850 N
MTR_7g101840 Medicago truncatula MTR_7g101840 N
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N
Pm030137 Prunus mume Pm030137 N
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N
SIGF Vitis vinifera VIT_08s0040g01560 N
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N
SIGF Arabidopsis thaliana AT2G36990 N
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N
TCM_022198 Theobroma cacao TCM_022198 N
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N