CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_06695
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_06695
T128999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00285
M01869_2.00
Neurospora crassa
NNRCCYDRN
NYHRGGYNN
PBM
Weirauch et al.(2014)
pTH8803
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC10523
C2H2 ZF
327
353
YRCKVEGCQNARFSSTACLLRHEREAH
CCC10523
C2H2 ZF
363
393
YLCTYEGCERSLPGHGFPRQWNLRDHMRRVH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028781
Oryza indica
BGIOSGA028781
I
Bo6g086740
Brassica oleracea
Bo6g086740
I
Bo6g119120
Brassica oleracea
Bo6g119120
I
Bo8g102870
Brassica oleracea
Bo8g102870
I
Bostr.3288s0141
Boechera stricta
Bostr.3288s0141
I
Bra003780
Brassica rapa
Bra003780
I
Bra031069
Brassica rapa
Bra031069
I
BRADI3G37544
Brachypodium distachyon
BRADI3G37544
I
Cagra.0402s0035
Capsella grandiflora
Cagra.0402s0035
I
Cagra.1961s0079
Capsella grandiflora
Cagra.1961s0079
I
Carubv10011394m.g
Capsella rubella
Carubv10011394m.g
I
Carubv10020965m.g
Capsella rubella
Carubv10020965m.g
I
cassava10604.m1
Manihot esculenta
cassava10604.m1
I
ERF017
Arabidopsis thaliana
AT1G19210
D
ERF018
Arabidopsis thaliana
AT1G74930
D
Eucgr.C03175
Eucalyptus grandis
Eucgr.C03175
I
Eucgr.C03297
Eucalyptus grandis
Eucgr.C03297
I
evm.TU.supercontig_266.5
Carica papaya
evm.TU.supercontig_266.5
I
F775_23111
Aegilops tauschii
F775_23111
I
fgenesh2_kg.1__2098__AT1G19210.1
Arabidopsis lyrata
fgenesh2_kg.1__2098__AT1G19210.1
I
gene12919-v1.0-hybrid
Fragaria vesca
gene12919-v1.0-hybrid
I
GRMZM2G097081
Zea mays
GRMZM2G097081
I
GRMZM2G163745
Zea mays
GRMZM2G163745
I
GSMUA_Achr9G14360_001
Musa acuminata
GSMUA_Achr9G14360_001
I
LPERR02G28660
Leersia perrieri
LPERR02G28660
I
LPERR08G14000
Leersia perrieri
LPERR08G14000
I
mgf017314m
Mimulus guttatus
mgf017314m
N
mgf021940m
Mimulus guttatus
mgf021940m
I
mgf024162m
Mimulus guttatus
mgf024162m
I
MTR_3g105480
Medicago truncatula
MTR_3g105480
I
MTR_3g105510
Medicago truncatula
MTR_3g105510
I
OB06G15740
Oryza brachyantha
OB06G15740
N
OB08G24280
Oryza brachyantha
OB08G24280
I
OBART06G06190
Oryza barthii
OBART06G06190
I
OBART08G16950
Oryza barthii
OBART08G16950
I
OGLUM06G06520
Oryza glumaepatula
OGLUM06G06520
I
OGLUM06G08330
Oryza glumaepatula
OGLUM06G08330
N
OGLUM08G17690
Oryza glumaepatula
OGLUM08G17690
I
OMERI03G32210
Oryza meridionalis
OMERI03G32210
I
OMERI06G09430
Oryza meridionalis
OMERI06G09430
N
ONIVA06G07190
Oryza nivara
ONIVA06G07190
I
ONIVA08G18470
Oryza nivara
ONIVA08G18470
I
OPUNC08G14840
Oryza punctata
OPUNC08G14840
I
ORA47
Vitis vinifera
VIT_04s0008g02230
I
ORA47
Arabidopsis lyrata
fgenesh2_kg.2__1761__AT1G74930.1
I
ORGLA06G0057200
Oryza glaberrima
ORGLA06G0057200
I
ORUFI06G06480
Oryza rufipogon
ORUFI06G06480
I
ORUFI08G18850
Oryza rufipogon
ORUFI08G18850
I
OS08G0454000
Oryza sativa
OS08G0454000
I
Pavir.Aa00296
Panicum virgatum
Pavir.Aa00296
I
Pavir.Fa00741
Panicum virgatum
Pavir.Fa00741
I
Pavir.Fb01602
Panicum virgatum
Pavir.Fb01602
I
Pavir.J00593
Panicum virgatum
Pavir.J00593
I
PGSC0003DMG400023295
Solanum tuberosum
PGSC0003DMG400023295
N
PGSC0003DMG400030781
Solanum tuberosum
PGSC0003DMG400030781
I
POPTR_0006s23480
Populus trichocarpa
POPTR_0006s23480
I
SapurV1A.0057s0300
Salix purpurea
SapurV1A.0057s0300
I
SapurV1A.0373s0040
Salix purpurea
SapurV1A.0373s0040
I
SapurV1A.2229s0010
Salix purpurea
SapurV1A.2229s0010
I
Si008104m.g
Setaria italica
Si008104m.g
I
Si015027m.g
Setaria italica
Si015027m.g
I
Si019636m.g
Setaria italica
Si019636m.g
I
Solyc06g054630.1
Solanum lycopersicum
Solyc06g054630.1
I
Solyc07g042230.1
Solanum lycopersicum
Solyc07g042230.1
N
TCM_037486
Theobroma cacao
TCM_037486
I
Thhalv10009812m.g
Eutrema salsugineum
Thhalv10009812m.g
I
TRAES3BF084200010CFD_g
Triticum aestivum
TRAES3BF084200010CFD_g
I
Traes_6DL_FA861D610
Triticum aestivum
Traes_6DL_FA861D610
I