TCM_037486 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_037486 T005660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.807 0.900
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.807 0.900
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.798 0.900
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.798 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY30203 AP2 16 67

Links

Other AP2 family TFs
Other Theobroma cacao TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.814
Bra031069 Brassica rapa Bra031069 I 0.808
Bo8g102870 Brassica oleracea Bo8g102870 I 0.808
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.807
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.807
ERF018 Arabidopsis thaliana AT1G74930 D 0.807
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.806
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.806
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.805
mgf024162m Mimulus guttatus mgf024162m I 0.804
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.802
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.801
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.801
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.800
Bo6g086740 Brassica oleracea Bo6g086740 I 0.800
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.800
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.800
mgf021940m Mimulus guttatus mgf021940m I 0.798
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.798
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.798
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.798
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.798
ERF017 Arabidopsis thaliana AT1G19210 D 0.798
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.797
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.797
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.797
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.796
Bo6g119120 Brassica oleracea Bo6g119120 I 0.796
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.795
MDP0000704216 Malus domestica MDP0000704216 I 0.794
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.793
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.793
Ca_09124 Cicer arietinum Ca_09124 I 0.793
Pm027117 Prunus mume Pm027117 I 0.792
29739.m003716 Ricinus communis 29739.m003716 I 0.792
Bra003780 Brassica rapa Bra003780 I 0.792
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.792
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.792
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.791
Bra015882 Brassica rapa Bra015882 I 0.791
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.791
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.789
MDP0000649022 Malus domestica MDP0000649022 I 0.789
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.787
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.787
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.787
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.786
mgf025452m Mimulus guttatus mgf025452m I 0.786
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.785
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.784
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.784
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.783
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.783
Bo8g068370 Brassica oleracea Bo8g068370 I 0.783
Bra016518 Brassica rapa Bra016518 I 0.783
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.782
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.782
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.782
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.781
TCM_037415 Theobroma cacao TCM_037415 I 0.781
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.781
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.781
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.780
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.779
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.779
Cla011318 Citrullus lanatus Cla011318 I 0.779
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.779
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.778
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.777
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.774
Cla007584 Citrullus lanatus Cla007584 I 0.773
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.773
Bra025719 Brassica rapa Bra025719 I 0.772
Ca_01683 Cicer arietinum Ca_01683 I 0.770
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.769
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.768
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.768
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.766
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.766
29739.m003647 Ricinus communis 29739.m003647 I 0.765
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.764
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.762
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.762
PK18548.1 Cannabis sativa PK18548.1 I 0.760
Si019636m.g Setaria italica Si019636m.g I 0.760
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.760
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.754
Bo2g023630 Brassica oleracea Bo2g023630 I 0.752
Ca_19297 Cicer arietinum Ca_19297 I 0.751
Ca_19295 Cicer arietinum Ca_19295 I 0.750
Bra020162 Brassica rapa Bra020162 I 0.750
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.750
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.749
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.748
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.748
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.747
Ca_19296 Cicer arietinum Ca_19296 I 0.745
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.744
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.743
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.740
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.738
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.737
Bra006599 Brassica rapa Bra006599 I 0.737
Bo3g015600 Brassica oleracea Bo3g015600 I 0.737
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.735
Bo9g149820 Brassica oleracea Bo9g149820 I 0.735
Bra002377 Brassica rapa Bra002377 I 0.735
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.735
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.735
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.735
Si008104m.g Setaria italica Si008104m.g I 0.730
ERF016 Arabidopsis thaliana AT5G21960 I 0.729
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.729
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.728
Cla022291 Citrullus lanatus Cla022291 I 0.728
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.728
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.728
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.727
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.727
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.717
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.713
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.711
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.711
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.711
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.711
OS02G0781300 Oryza sativa OS02G0781300 I 0.711
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.711
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.711
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.711
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.710
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.708
OBART08G16950 Oryza barthii OBART08G16950 I 0.698
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.698
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.698
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.698
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.698
Si015027m.g Setaria italica Si015027m.g I 0.698
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.698
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.698
OB08G24280 Oryza brachyantha OB08G24280 I 0.698
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.698
OS08G0454000 Oryza sativa OS08G0454000 I 0.698
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.698
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.698
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.698
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.692
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.690
F775_23111 Aegilops tauschii F775_23111 I 0.689
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.685
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.684
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.684
OBART06G06190 Oryza barthii OBART06G06190 I 0.684
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.684
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.684
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.684
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.684
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.683
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.680