Brh_R013551 (Buceros rhinoceros)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Brh_R013551 T133671_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIVEP2
M10101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIBP1_Q6 		0.825 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R013551 C2H2 ZF 189 211
Brh_R013551 C2H2 ZF 217 239
Brh_R013551 C2H2 ZF 1818 1840
Brh_R013551 C2H2 ZF 1846 1870

Links

Other C2H2 ZF family TFs
Other Buceros rhinoceros TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000741 Ricinus communis 29814.m000741 I 0.000
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.000
AT5G05550 Arabidopsis thaliana AT5G05550 D 0.000
Bo5g136850 Brassica oleracea Bo5g136850 I 0.000
Bo9g177060 Brassica oleracea Bo9g177060 I 0.000
Bostr.13129s0416 Boechera stricta Bostr.13129s0416 I 0.000
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.000
Bra009119 Brassica rapa Bra009119 I 0.000
Bra034165 Brassica rapa Bra034165 I 0.000
Bra034866 Brassica rapa Bra034866 I 0.000
Cagra.1504s0056 Capsella grandiflora Cagra.1504s0056 I 0.000
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.000
MDP0000097759 Malus domestica MDP0000097759 N 0.000
MDP0000943251 Malus domestica MDP0000943251 N 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.000
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.000