Scas_Contig576.5 (Saccharomyces castellii)
Copper fist

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00649 (Copper-fist) IPR001083 Scas_Contig576.5 T164173_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MAC1
M08552_2.00
Saccharomyces cerevisiae
TTTGCTCR

YGAGCAAA
Misc
DeBoer et al.(2011)
YMR021C_1540
0.795 0.795
MAC1
M10409_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MAC1_Q6_01
0.795 0.795
MAC1
M10410_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MAC1_Q6
0.795 0.795
MAC1
M08454_2.00
Saccharomyces cerevisiae
TTTGCTCR

YGAGCAAA
COMPILED
Mathelier et al.(2014)
MA0326.1
0.795 0.795
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig576.5 Copper fist 2 40

Links

Other Copper fist family TFs
Other Saccharomyces castellii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30093.m000368 Ricinus communis 30093.m000368 N
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N
Ca_00041 Cicer arietinum Ca_00041 N
Cucsa.076000 Cucumis sativus Cucsa.076000 N
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N
GLYMA05G30150 Glycine max GLYMA05G30150 N
GLYMA08G13310 Glycine max GLYMA08G13310 N
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N
mgf016294m Mimulus guttatus mgf016294m N
PK13777.1 Cannabis sativa PK13777.1 N
Pm003925 Prunus mume Pm003925 N
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N
TCM_006252 Theobroma cacao TCM_006252 N
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N