DMRTA2 (Loxodonta africana)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 ENSLAFG00000021953 T169085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.965 1.000
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.965 1.000
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.965 1.000
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.965 1.000
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.965 0.979
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.965 0.957
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.965 0.957
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.965 0.957
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.956 0.915
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.934 0.787
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.934 0.830
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.934 0.830
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.933 0.787
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.933 0.787
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.933 0.787
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.933 0.787
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.933 0.787
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.932 0.851
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.932 0.851
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.932 0.851
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.932 0.851
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.930 0.787
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.900 0.702
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.900 0.702
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.877 0.638
ENSMODG00000010059
M01932_2.00 		Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN		 PBM
Weirauch et al.(2014)
pTH9215 		0.876 0.638
Dmrtc2
M00789_2.00 		Mus musculus
NNNATGTATHMNN
NNKDATACATNNN		 PBM
Weirauch et al.(2013)
pTH3205 		0.874 0.681
DMRTC2
M04685_2.00 		Homo sapiens
TGTAWCRTTB
VAAYGWTACA		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1 		0.874 0.681
DMRTC2
M04686_2.00 		Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2 		0.874 0.681
DMRTC2
M04688_2.00 		Homo sapiens
TGTATCGTTC
GAACGATACA		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1 		0.874 0.681
DMRTC2
M04689_2.00 		Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2 		0.874 0.681
DMRTC2
M10432_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT7_01 		0.874 0.681
DMRTC2
M04687_2.00 		Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX 		0.874 0.681
DMRTC2
M04690_2.00 		Homo sapiens
YGTATCGTTY
RAACGATACR		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1 		0.874 0.681
DMRTC2
M04691_2.00 		Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2 		0.874 0.681
DMRTC2
M01926_2.00 		Cavia porcellus
NNHDWNDN
NHNWHDNN		 PBM
Weirauch et al.(2014)
pTH9250 		0.873 0.660
ENSOANG00000013938
M01933_2.00 		Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN		 PBM
Weirauch et al.(2014)
pTH9271 		0.860 0.638
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.859 0.638
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.859 0.638
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000017950 DM 65 111
ENSLAFP00000018592 DM 26 72

Links

Other DM family TFs
Other Loxodonta africana TFs

652 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022471 Oryza indica BGIOSGA022471 I
BGIOSGA028781 Oryza indica BGIOSGA028781 I
Bo6g086740 Brassica oleracea Bo6g086740 I
Bo6g119120 Brassica oleracea Bo6g119120 I
Bo8g102870 Brassica oleracea Bo8g102870 I
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I
Bra003780 Brassica rapa Bra003780 I
Bra031069 Brassica rapa Bra031069 I
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I
Carubv10011394m.g Capsella rubella Carubv10011394m.g I
Carubv10020965m.g Capsella rubella Carubv10020965m.g I
cassava10604.m1 Manihot esculenta cassava10604.m1 I
ERF017 Arabidopsis thaliana AT1G19210 D
ERF018 Arabidopsis thaliana AT1G74930 D
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I
F775_23111 Aegilops tauschii F775_23111 I
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I
GRMZM2G097081 Zea mays GRMZM2G097081 I
GRMZM2G163745 Zea mays GRMZM2G163745 I
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I
LPERR02G28660 Leersia perrieri LPERR02G28660 I
LPERR08G14000 Leersia perrieri LPERR08G14000 I
mgf017314m Mimulus guttatus mgf017314m N
mgf021940m Mimulus guttatus mgf021940m I
mgf024162m Mimulus guttatus mgf024162m I
MTR_3g105480 Medicago truncatula MTR_3g105480 I
MTR_3g105510 Medicago truncatula MTR_3g105510 I
OB06G15740 Oryza brachyantha OB06G15740 N
OB08G24280 Oryza brachyantha OB08G24280 I
OBART06G06190 Oryza barthii OBART06G06190 I
OBART08G16950 Oryza barthii OBART08G16950 I
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I
OGLUM06G08330 Oryza glumaepatula OGLUM06G08330 N
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I
OMERI06G09430 Oryza meridionalis OMERI06G09430 N
ONIVA06G07190 Oryza nivara ONIVA06G07190 I
ONIVA08G18470 Oryza nivara ONIVA08G18470 I
OPUNC08G14840 Oryza punctata OPUNC08G14840 I
ORA47 Vitis vinifera VIT_04s0008g02230 I
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I
OS08G0454000 Oryza sativa OS08G0454000 I
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I
Pavir.J00593 Panicum virgatum Pavir.J00593 I
PGSC0003DMG400023295 Solanum tuberosum PGSC0003DMG400023295 N
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I
Si008104m.g Setaria italica Si008104m.g I
Si015027m.g Setaria italica Si015027m.g I
Si019636m.g Setaria italica Si019636m.g I
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I
Solyc07g042230.1 Solanum lycopersicum Solyc07g042230.1 N
TCM_037486 Theobroma cacao TCM_037486 I
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I