EBF1 (Homo sapiens)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSG00000164330 T174553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF1
M02963_2.00		 Homo sapiens
DDTCCCWDGGGANT
ANTCCCHWGGGAHH		 SELEX
Jolma et al.(2013)
EBF1_1		 (Direct) (Direct)
EBF1
M09044_2.00		 Homo sapiens
DBYCYCWKGGGAVHN
NDBTCCCMWGRGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_HUMAN.H11MO.0.A		 (Direct) (Direct)
EBF1
M10462_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE1_Q6_01		 (Direct) (Direct)
EBF1
M10463_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE1_Q6		 (Direct) (Direct)
EBF1
M10464_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF1_04		 (Direct) (Direct)
EBF1
M10465_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF1_05		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		1.000 1.000
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		1.000 1.000
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		1.000 1.000
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		1.000 1.000
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.879 0.879
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.984 0.984
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.853 0.853
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.749 0.749
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.968 0.968
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000322898 EBF1 17 247
ENSP00000370029 EBF1 17 162
ENSP00000370029 EBF1 161 224
ENSP00000428020 EBF1 17 247
ENSP00000477809 EBF1 1 63

Links

Other EBF1 family TFs
Other Homo sapiens TFs

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29883.m002035 Ricinus communis 29883.m002035 I
30072.m000955 Ricinus communis 30072.m000955 I
30174.m008898 Ricinus communis 30174.m008898 I
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
BGIOSGA032254 Oryza indica BGIOSGA032254 I
Bo1g153580 Brassica oleracea Bo1g153580 I
Bo4g016000 Brassica oleracea Bo4g016000 I
Bo4g191530 Brassica oleracea Bo4g191530 I
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I
Bra004693 Brassica rapa Bra004693 I
Bra036436 Brassica rapa Bra036436 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I
Carubv10015417m.g Capsella rubella Carubv10015417m.g I
cassava15337.m1 Manihot esculenta cassava15337.m1 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava25975.m1 Manihot esculenta cassava25975.m1 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
Ca_12213 Cicer arietinum Ca_12213 I
Ca_19716 Cicer arietinum Ca_19716 I
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
Cla002965 Citrullus lanatus Cla002965 I
Cla007068 Citrullus lanatus Cla007068 I
Cucsa.338130 Cucumis sativus Cucsa.338130 I
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I
GLYMA02G27230 Glycine max GLYMA02G27230 I
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G31830 Glycine max GLYMA03G31830 I
GLYMA10G11031 Glycine max GLYMA10G11031 I
GLYMA19G30200 Glycine max GLYMA19G30200 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I
LBD16 Arabidopsis thaliana AT2G42430 D
LBD16 Arabidopsis lyrata scaffold_403099.1 I
LBD20 Arabidopsis thaliana AT3G03760 I
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I
LBD20 Vitis vinifera VIT_08s0056g01650 I
LBD30 Vitis vinifera VIT_15s0048g00830 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000322059 Malus domestica MDP0000322059 I
mgf006429m Mimulus guttatus mgf006429m I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MTR_6g027710 Medicago truncatula MTR_6g027710 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
OB10G12360 Oryza brachyantha OB10G12360 I
OBART03G10450 Oryza barthii OBART03G10450 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
ONIVA10G03250 Oryza nivara ONIVA10G03250 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
OPUNC10G02630 Oryza punctata OPUNC10G02630 I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I
OS03G0246900 Oryza sativa OS03G0246900 I
OS10G0162600 Oryza sativa OS10G0162600 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I
Pm017936 Prunus mume Pm017936 I
Pm020629 Prunus mume Pm020629 I
Pm028642 Prunus mume Pm028642 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I
TCM_004106 Theobroma cacao TCM_004106 I
TCM_005496 Theobroma cacao TCM_005496 I
TCM_025849 Theobroma cacao TCM_025849 I
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I