ENSLACG00000016329 (Latimeria chalumnae)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSLACG00000016329 T186028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxj1
M00161_2.00 		Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN		 PBM
Badis et al.(2009)
Foxj1_3125 		0.847 0.860
FOXJ1
M10547_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH4_01 		0.847 0.860
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.674 0.616
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.674 0.616
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.674 0.616
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.674 0.616
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.674 0.616
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.674 0.616
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.674 0.616
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.674 0.616
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.674 0.616
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.674 0.616
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.674 0.616
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.674 0.616
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.674 0.616
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.674 0.616
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.674 0.616
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.671 0.651
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018547 Forkhead 135 224

Links

Other Forkhead family TFs
Other Latimeria chalumnae TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30209.m001510 Ricinus communis 30209.m001510 N
AT3G18380 Arabidopsis thaliana AT3G18380 N
Bo1g117640 Brassica oleracea Bo1g117640 N
Bo5g118650 Brassica oleracea Bo5g118650 N
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N
Bra022316 Brassica rapa Bra022316 N
Bra037587 Brassica rapa Bra037587 N
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N
Carubv10014092m.g Capsella rubella Carubv10014092m.g N
CBG05223 Caenorhabditis briggsae CBG05223 N
Cucsa.032420 Cucumis sativus Cucsa.032420 N
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N
GLYMA12G18490 Glycine max GLYMA12G18490 N
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N
GRMZM2G111204 Zea mays GRMZM2G111204 N
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N
mgf014854m Mimulus guttatus mgf014854m N
Ogr09559 Ophisaurus gracilis Ogr09559 N
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N
PK03811.1 Cannabis sativa PK03811.1 N
Pm011344 Prunus mume Pm011344 N
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N
TRIUR3_26093 Triticum urartu TRIUR3_26093 N