CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA025964
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA025964
T199885_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA025964-PA
GRAS
52
418
LLSLLLRCAEAVAMDQLPEARDLLPEIAELASPFGSSPERVAAYFGDALCARVLSSYLGAYSPLALRPLAAAQSRRISGAFQAYNALSPLVKFSHFTANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRPTKPRSLRITGLGASLDVLEATGRRLADFAASLGLPFEFRPIEGKIGHVADAAALLGPRHHGEATVVHWMHHCLYDVTGSDAGTVRLLKSLRPKLITIVEQDLGHSGDFLGRFVEALHYYSALFDALGDGAGAAEEEAAERHAVERQLLGAEIRNIVAVGGPKRTGEVRVERWGDELRRAGFRPVTLAGSPAAQARLLLGMYPWKGYTLVEEDGCLKLGWKDLSLLTASSWE
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003255
Ricinus communis
29983.m003255
N
Aquca_008_00040
Aquilegia coerulea
Aquca_008_00040
N
Aquca_102_00032
Aquilegia coerulea
Aquca_102_00032
N
BGIOSGA000702
Oryza indica
BGIOSGA000702
N
cassava12533.valid.m1
Manihot esculenta
cassava12533.valid.m1
N
cassava18740.valid.m1
Manihot esculenta
cassava18740.valid.m1
N
Ca_19014
Cicer arietinum
Ca_19014
N
Cla007849
Citrullus lanatus
Cla007849
N
Cucsa.147930
Cucumis sativus
Cucsa.147930
N
Eucgr.K00939
Eucalyptus grandis
Eucgr.K00939
N
evm.TU.supercontig_34.111
Carica papaya
evm.TU.supercontig_34.111
N
gene10278-v1.0-hybrid
Fragaria vesca
gene10278-v1.0-hybrid
N
Gorai.005G204800
Gossypium raimondii
Gorai.005G204800
N
Gorai.008G152400
Gossypium raimondii
Gorai.008G152400
N
GRMZM2G004690
Zea mays
GRMZM2G004690
N
GRMZM2G082745
Zea mays
GRMZM2G082745
N
GSMUA_Achr1G08820_001
Musa acuminata
GSMUA_Achr1G08820_001
N
GSMUA_Achr2G02900_001
Musa acuminata
GSMUA_Achr2G02900_001
N
GSMUA_AchrUn_randomG13850_001
Musa acuminata
GSMUA_AchrUn_randomG13850_001
N
LPERR01G28620
Leersia perrieri
LPERR01G28620
N
Lus10039791.g
Linum usitatissimum
Lus10039791.g
N
MDP0000089136
Malus domestica
MDP0000089136
N
MDP0000237588
Malus domestica
MDP0000237588
N
MDP0000315130
Malus domestica
MDP0000315130
N
OB01G42000
Oryza brachyantha
OB01G42000
N
OBART01G33150
Oryza barthii
OBART01G33150
N
OGLUM01G37340
Oryza glumaepatula
OGLUM01G37340
N
OLONG_014986
Oryza longistaminata
OLONG_014986
N
OMERI01G30050
Oryza meridionalis
OMERI01G30050
N
ONIVA01G37460
Oryza nivara
ONIVA01G37460
N
ORGLA01G0271200
Oryza glaberrima
ORGLA01G0271200
N
ORUFI01G36290
Oryza rufipogon
ORUFI01G36290
N
OS01G0780800
Oryza sativa
OS01G0780800
N
Pavir.Eb03405
Panicum virgatum
Pavir.Eb03405
N
PK16281.1
Cannabis sativa
PK16281.1
N
Pm015354
Prunus mume
Pm015354
N
POPTR_0013s14170
Populus trichocarpa
POPTR_0013s14170
N
POPTR_0019s13550
Populus trichocarpa
POPTR_0019s13550
N
PRUPE_ppa017439mg
Prunus persica
PRUPE_ppa017439mg
N
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
Sb03g036430
Sorghum bicolor
Sb03g036430
N
Si002762m.g
Setaria italica
Si002762m.g
N
TCM_007971
Theobroma cacao
TCM_007971
N
VIT_12s0059g01980
Vitis vinifera
VIT_12s0059g01980
N