POPTR_0006s08690 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0006s08690 T201201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s08690.1 GRAS 373 744

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27568.m000253 Ricinus communis 27568.m000253 N 0.714
29767.m000200 Ricinus communis 29767.m000200 N 0.797
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.727
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.700
Bo3g031890 Brassica oleracea Bo3g031890 N 0.711
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.717
Bra000012 Brassica rapa Bra000012 N 0.708
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.712
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.712
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.808
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.719
Ca_21138 Cicer arietinum Ca_21138 N 0.773
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.843
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.724
Cla018179 Citrullus lanatus Cla018179 N 0.773
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.781
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.786
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.719
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.793
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.770
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.778
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.775
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N 0.765
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.705
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.730
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.703
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.703
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.703
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.781
mgf011165m Mimulus guttatus mgf011165m N 0.738
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.751
OBART03G30260 Oryza barthii OBART03G30260 N 0.703
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.703
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.703
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.703
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.703
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.727
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.843
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.703
OS03G0690600 Oryza sativa OS03G0690600 N 0.700
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.703
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.705
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.729
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.768
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.751
PK20526.1 Cannabis sativa PK20526.1 N 0.751
Pm002685 Prunus mume Pm002685 N 0.803
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.708
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.800
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.949
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.714
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.705
SCL9 Arabidopsis thaliana AT2G37650 N 0.726
Si034417m.g Setaria italica Si034417m.g N 0.716
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.765
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.735
TCM_021920 Theobroma cacao TCM_021920 N 0.822
TCM_042705 Theobroma cacao TCM_042705 N 0.741
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.716
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.800