CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zhx3
(
Danio rerio
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSDARG00000019774
T208555_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000005108
Homeodomain
296
346
YNASMDNSSFLKTSFSKFPYPTKAELCYLTVVTKYPEEQIKIWFTAQRLKQ
ENSDARP00000005108
Homeodomain
607
661
NKTKKSQEQLSALKESFLISQFPNQEEVDRLINLTGLSVREVRKWFSDRRYHFRN
ENSDARP00000005108
Homeodomain
736
788
RYKEREPHQVRALEASFTQEPDPTSEEVDRLRAETKMTRREIHGWFAERRRRV
ENSDARP00000005108
Homeodomain
894
950
SQYRGKKTPEQLHLLKQVFARTHWPSSPQYNELITKTGLPRPEVVRWFGDCRYVLKN
ENSDARP00000005108
Homeodomain
965
1011
EEDFQKANISVLQEHLDTHGKLDETKLEEIAKSSGFGEESIRRWFAK
ENSDARP00000105146
Homeodomain
296
346
YNASMDNSSFLKTSFSKFPYPTKAELCYLTVVTKYPEEQIKIWFTAQRLKQ
ENSDARP00000105146
Homeodomain
607
661
NKTKKSQEQLSALKESFLISQFPNQEEVDRLINLTGLSVREVRKWFSDRRYHFRN
ENSDARP00000105146
Homeodomain
736
788
RYKEREPHQVRALEASFTQEPDPTSEEVDRLRAETKMTRREIHGWFAERRRRV
ENSDARP00000105146
Homeodomain
894
950
SQYRGKKTPEQLHLLKQVFARTHWPSSPQYNELITKTGLPRPEVVRWFGDCRYVLKN
ENSDARP00000105146
Homeodomain
965
1011
EEDFQKANISVLQEHLDTHGKLDETKLEEIAKSSGFGEESIRRWFAK
ENSDARP00000141318
Homeodomain
296
346
YNASMDNSSFLKTSFSKFPYPTKAELCYLTVVTKYPEEQIKIWFTAQRLKQ
ENSDARP00000141318
Homeodomain
607
661
NKTKKSQEQLSALKESFLISQFPNQEEVDRLINLTGLSVREVRKWFSDRRYHFRN
ENSDARP00000141318
Homeodomain
736
788
RYKEREPHQVRALEASFTQEPDPTSEEVDRLRAETKMTRREIHGWFAERRRRV
ENSDARP00000141318
Homeodomain
894
950
SQYRGKKTPEQLHLLKQVFARTHWPSSPQYNELITKTGLPRPEVVRWFGDCRYVLKN
ENSDARP00000141318
Homeodomain
965
1011
EEDFQKANISVLQEHLDTHGKLDETKLEEIAKSSGFGEESIRRWFAK
Links
Other
Homeodomain
family TFs
Other
Danio rerio
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28694.m000665
Ricinus communis
28694.m000665
N
Bo1g134830
Brassica oleracea
Bo1g134830
N
Bo5g132010
Brassica oleracea
Bo5g132010
N
Bostr.28625s0323
Boechera stricta
Bostr.28625s0323
N
Bra021513
Brassica rapa
Bra021513
N
Cagra.0736s0021
Capsella grandiflora
Cagra.0736s0021
N
Carubv10014142m.g
Capsella rubella
Carubv10014142m.g
N
cassava2716.m1
Manihot esculenta
cassava2716.m1
N
cassava34925.m1
Manihot esculenta
cassava34925.m1
N
cassava34926.m1
Manihot esculenta
cassava34926.m1
N
Ca_10077
Cicer arietinum
Ca_10077
N
chr3.CM0049.30.nd
Lotus japonicus
chr3.CM0049.30.nd
N
Cla015827
Citrullus lanatus
Cla015827
N
Cucsa.360530
Cucumis sativus
Cucsa.360530
N
evm.TU.supercontig_25.41
Carica papaya
evm.TU.supercontig_25.41
N
gene23043-v1.0-hybrid
Fragaria vesca
gene23043-v1.0-hybrid
N
GLYMA07G01170
Glycine max
GLYMA07G01170
N
GLYMA08G20550
Glycine max
GLYMA08G20550
N
Gorai.011G064500
Gossypium raimondii
Gorai.011G064500
N
LBD22
Arabidopsis thaliana
AT3G13850
N
LBD22
Arabidopsis lyrata
fgenesh2_kg.3__1489__AT3G13850.1
N
MDP0000257227
Malus domestica
MDP0000257227
N
mgf019664m
Mimulus guttatus
mgf019664m
N
MTR_8g017090
Medicago truncatula
MTR_8g017090
N
PGSC0003DMG400004880
Solanum tuberosum
PGSC0003DMG400004880
N
Pm013344
Prunus mume
Pm013344
N
POPTR_0001s20110
Populus trichocarpa
POPTR_0001s20110
N
POPTR_0003s04520
Populus trichocarpa
POPTR_0003s04520
N
SapurV1A.0697s0010
Salix purpurea
SapurV1A.0697s0010
N
Solyc06g062630.2
Solanum lycopersicum
Solyc06g062630.2
N
TCM_029050
Theobroma cacao
TCM_029050
N
TCM_029052
Theobroma cacao
TCM_029052
N