CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LOC100909604 *(Rattus norvegicus)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSRNOG00000048917	T215492_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxa6 M00494_2.00	Mus musculus	NWWATKRNN	NNYMATWWN	PBM Berger et al.(2008) Hoxa6_1040	0.867	1.000
HOXA6 M04974_2.00	Homo sapiens	NNTAATKRVN	NBYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_HT-SELEX	0.867	1.000
HOXA6 M04975_2.00	Homo sapiens	NNTAATKRBN	NVYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_1	0.867	1.000
HOXA6 M04976_2.00	Homo sapiens	NTAAYGRY	RYCRTTAN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_2	0.867	1.000
Hoxb6 M00381_2.00	Mus musculus	NNDHNNN	NNNDHNN	PBM Berger et al.(2008) Hoxb6_3428	0.862	0.965
HOXB6 M04999_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXB6_eDBD_HT-SELEX	0.862	0.965
HOXB6 M05000_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_1	0.862	0.965
HOXB6 M05001_2.00	Homo sapiens	NTWATKRB	VYMATWAN	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_2	0.862	0.965
Hoxc6 M00392_2.00	Mus musculus	TTAATTAB	VTAATTAA	PBM Berger et al.(2008) Hoxc6_3954	0.854	0.965
Hoxb8 M00517_2.00	Mus musculus	NWWAYNDNN	NNHNRTWWN	PBM Berger et al.(2008) Hoxb8_3780	0.853	0.842
HOXB8 M05048_2.00	Homo sapiens	NTAATKRM	KYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_HT-SELEX	0.853	0.842
HOXB8 M09141_2.00	Homo sapiens	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_HUMAN.H11MO.0.C	0.853	0.842
Hoxb8 M09214_2.00	Mus musculus	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_MOUSE.H11MO.0.C	0.853	0.842
HOXB8 M05049_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_1	0.853	0.842
HOXB8 M05050_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_2	0.853	0.842
HOXD8 M03221_2.00	Homo sapiens	VHWAATKWDN	NHWMATTWDB	SELEX Jolma et al.(2013) HOXD8_1	0.853	0.825
HOXD8 M05310_2.00	Homo sapiens	BTAATKRY	RYMATTAV	SELEX Yin et al.(2017) HOXD8_eDBD_HT-SELEX	0.853	0.825
HOXD8 M05311_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_1	0.853	0.825
HOXD8 M05312_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_2	0.853	0.825
abd-A M03770_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_1	0.846	0.930
abd-A M03771_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_2	0.846	0.930
abd-A M06475_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0206.1	0.846	0.930
abd-A M06210_2.00	Drosophila melanogaster	WTWATKDM	KHMATWAW	B1H Zhu et al.(2011) Abd-A_FlyReg_FBgn0000014	0.846	0.930
abd-A M09671_2.00	Drosophila melanogaster	HTAATKRH	DYMATTAD	Misc Kulakovskiy et al.(2009) abd-A	0.846	0.930
abd-A M10778_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDA_Q6	0.846	0.930
Hoxd8 M00436_2.00	Mus musculus	NNWWYNNN	NNNRWWNN	PBM Berger et al.(2008) Hoxd8_2644	0.841	0.807
Ubx M00558_2.00	Drosophila melanogaster	NWWAYDDNN	NNHHRTWWN	PBM Busser et al.(2012a) Ubx	0.837	0.912
Ubx M03804_2.00	Drosophila melanogaster	NTAATKRH	DYMATTAN	SELEX Nitta et al.(2015) Ubx_1	0.837	0.912
Ubx M06499_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Mathelier et al.(2014) MA0094.2	0.837	0.912
Ubx M06273_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Zhu et al.(2011) Ubx_Cell_FBgn0003944	0.837	0.912
Ubx M06274_2.00	Drosophila melanogaster	TAATKD	HMATTA	B1H Zhu et al.(2011) Ubx_FlyReg_FBgn0003944	0.837	0.912
Ubx M06275_2.00	Drosophila melanogaster	NTTWATKR	YMATWAAN	B1H Zhu et al.(2011) Ubx_SOLEXA_FBgn0003944	0.837	0.912
Ubx M09680_2.00	Drosophila melanogaster	TTAATKR	YMATTAA	Misc Kulakovskiy et al.(2009) Ubx	0.837	0.912
Ubx M10788_2.00	Drosophila melanogaster	NNVNNNNTAATKRNBHNND	HNNDVNYMATTANNNNBNN	Transfac Matys et al.(2006) I$UBX_01	0.837	0.912
Hoxa7 M00476_2.00	Mus musculus	NNWAYNDNN	NNHNRTWNN	PBM Berger et al.(2008) Hoxa7_2668	0.835	0.965
Hoxa7 M00477_2.00	Mus musculus	NYHHYNNNN	NNNNRDDRN	PBM Berger et al.(2008) Hoxa7_3750	0.835	0.965
HOXA7 M05069_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_HT-SELEX	0.835	0.965
Antp M06549_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0166.1	0.835	0.965
Antp M06374_2.00	Drosophila melanogaster	YTTAATKA	TMATTAAR	B1H Zhu et al.(2011) Antp_Cell_FBgn0000095	0.835	0.965
Antp M06375_2.00	Drosophila melanogaster	WTAATW	AATTAW	B1H Zhu et al.(2011) Antp_FlyReg_FBgn0000095	0.835	0.965
Antp M06376_2.00	Drosophila melanogaster	NHTAATKR	YMATTADN	B1H Zhu et al.(2011) Antp_SOLEXA_FBgn0000095	0.835	0.965
Antp M09682_2.00	Drosophila melanogaster	TYTTWATKA	TMATWAARA	Misc Kulakovskiy et al.(2009) Antp	0.835	0.965
Antp M10789_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ANTP_Q6_01	0.835	0.965
HOXA7 M10679_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA7_01	0.835	0.965
HOXA7 M05070_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_1	0.835	0.965
HOXA7 M05071_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_2	0.835	0.965
Hoxc8 M00391_2.00	Mus musculus	NNDNYNNNN	NNNNRNHNN	PBM Berger et al.(2008) Hoxc8_3429	0.820	0.825
HOXC8 M04912_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) HOXC8_FL_HT-SELEX	0.820	0.825
HOXC8 M10636_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXC8_Q3	0.820	0.825
HOXC8 M04913_2.00	Homo sapiens	NYMATKRN	NYMATKRN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_1	0.820	0.825
HOXC8 M04914_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_2	0.820	0.825
HOXB7 M00334_2.00	Homo sapiens	NBRDNNN	NNNHYVN	PBM Barrera et al.(2016) HOXB7_REF	0.819	0.930
Hoxb7 M00481_2.00	Mus musculus	NNWAYNDN	NHNRTWNN	PBM Berger et al.(2008) Hoxb7_3953	0.819	0.930
HOXB7 M05404_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_HT-SELEX	0.819	0.930
HOXB7 M05407_2.00	Homo sapiens	BBTAATTRCN	NGYAATTAVV	SELEX Yin et al.(2017) HOXB7_FL_HT-SELEX	0.819	0.930
HOXB7 M09166_2.00	Homo sapiens	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_HUMAN.H11MO.0.C	0.819	0.930
Hoxb7 M09206_2.00	Mus musculus	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_MOUSE.H11MO.0.C	0.819	0.930
HOXB7 M05405_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_1	0.819	0.930
HOXB7 M05406_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_2	0.819	0.930
HOXB7 M05408_2.00	Homo sapiens	NNTAATKRCN	NGYMATTANN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_1	0.819	0.930
HOXB7 M05409_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_2	0.819	0.930
HOXB7 M00333_2.00	Homo sapiens	NHATWTATTN	NAATAWATDN	PBM Barrera et al.(2016) HOXB7_R189C	0.819	0.912
ftz M03795_2.00	Drosophila melanogaster	WTAATTRC	GYAATTAW	SELEX Nitta et al.(2015) ftz_1	0.809	0.877
ftz M06488_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0225.1	0.809	0.877
ftz M06247_2.00	Drosophila melanogaster	VTTAATKA	TMATTAAB	B1H Zhu et al.(2011) Ftz_Cell_FBgn0001077	0.809	0.877
ftz M06248_2.00	Drosophila melanogaster	TAATKRNH	DNYMATTA	B1H Zhu et al.(2011) ftz_FlyReg_FBgn0001077	0.809	0.877
ftz M06249_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Zhu et al.(2011) Ftz_SOLEXA_FBgn0001077	0.809	0.877
ftz M09679_2.00	Drosophila melanogaster	YTAATKRNN	NNYMATTAR	Misc Kulakovskiy et al.(2009) ftz	0.809	0.877
ftz M10787_2.00	Drosophila melanogaster	CTTAATTRBHBB	VVDVYAATTAAG	Transfac Matys et al.(2006) I$FTZ_01	0.809	0.877
CBG00029 M01240_2.00	Caenorhabditis briggsae	ATTAATTA	TAATTAAT	PBM Lambert et al.(2019) pTH11471	0.786	0.737
HOXB7 M00331_2.00	Homo sapiens	NNNNNNY	RNNNNNN	PBM Barrera et al.(2016) HOXB7_K191R	0.762	0.912
Q8I9J5_9BILA M02214_2.00	Spadella cephaloptera	NVTAWTWABN	NVTWAWTABN	PBM Weirauch et al.(2014) pTH6164	0.758	0.702
HOXB7 M00332_2.00	Homo sapiens	NDWATATAYN	NRTATATWHN	PBM Barrera et al.(2016) HOXB7_M190L	0.743	0.912
egl-5 M09581_2.00	Caenorhabditis elegans	DWTTWATGGS	SCCATWAAWH	Misc Heinz et al.(2010) cElegans-L3-EGL5_modEncode	0.718	0.561
CBG00023 M02062_2.00	Caenorhabditis briggsae	NWWATKDNNN	NNNHMATWWN	PBM Weirauch et al.(2014) pTH5778	0.718	0.544
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.675	0.912
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.675	0.912
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.675	0.912
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.675	0.912
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.675	0.895
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.675	0.895
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.675	0.895
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.675	0.895
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.675	0.895
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.675	0.895
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.675	0.895
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.675	0.895
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.675	0.895
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.675	0.895
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.675	0.895
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.675	0.895
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.675	0.895
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.675	0.895
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.675	0.895
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.675	0.895
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.675	0.895
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.664	0.895
CBG23031 M01245_2.00	Caenorhabditis briggsae	NTTWATKRNN	NNYMATWAAN	PBM Lambert et al.(2019) pTH11458	0.649	0.509
Hoxc9 M00470_2.00	Mus musculus	NGTAATWAAN	NTTWATTACN	PBM Berger et al.(2008) Hoxc9_2367	0.630	0.737
Hoxd9 M03282_2.00	Mus musculus	TTTWATKKB	VMMATWAAA	SELEX Jolma et al.(2013) Hoxd9_1	0.630	0.737
Hoxd9 M03283_2.00	Mus musculus	DWTTWATKRY	RYMATWAAWH	SELEX Jolma et al.(2013) Hoxd9_2	0.630	0.737
Hoxd9 M03284_2.00	Mus musculus	DTTWAYGRB	VYCRTWAAH	SELEX Jolma et al.(2013) Hoxd9_3	0.630	0.737
HOXC9 M05331_2.00	Homo sapiens	GTCGTAAAAN	NTTTTACGAC	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_1	0.630	0.737
HOXC9 M05332_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_2	0.630	0.737
HOXD9 M05104_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_1	0.630	0.737
HOXD9 M05105_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_2	0.630	0.737
HOXD9 M05108_2.00	Homo sapiens	RTCGTAAAWN	NWTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_1	0.630	0.737
HOXD9 M05109_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_2	0.630	0.737
Hoxc9 M08137_2.00	Mus musculus	NWGATTTATDGSH	DSCHATAAATCWN	ChIP-seq Mathelier et al.(2014) MA0485.1	0.630	0.737
HOXC9 M09161_2.00	Homo sapiens	HTTWATKGCH	DGCMATWAAD	Misc Kulakovskiy et al.(2013) HXC9_HUMAN.H11MO.0.C	0.630	0.737
Hoxc9 M09574_2.00	Mus musculus	TGATTTATDGCH	DGCHATAAATCA	Misc Heinz et al.(2010) Ainv15-Hoxc9_GSE21812	0.630	0.737
HOXD9 M10686_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD9_Q2	0.630	0.737
HOXC9 M05333_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_1	0.630	0.737
HOXC9 M05334_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_2	0.630	0.737
HOXD9 M05106_2.00	Homo sapiens	NNTTWATKRC	GYMATWAANN	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_1	0.630	0.737
HOXD9 M05107_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_2	0.630	0.737
HOXD9 M05110_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_1	0.630	0.737
HOXD9 M05111_2.00	Homo sapiens	NDTTWATKRC	GYMATWAAHN	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_2	0.630	0.737
Hoxb9 M00410_2.00	Mus musculus	NTTWAYDDNN	NNHHRTWAAN	PBM Berger et al.(2008) Hoxb9_3413	0.630	0.719
Hoxa9 M00475_2.00	Mus musculus	NNDDBNNN	NNNVHHNN	PBM Berger et al.(2008) Hoxa9_2622	0.630	0.719
HOXA9 M03085_2.00	Homo sapiens	NNDTTWAYGAYN	NRTCRTWAAHNN	SELEX Jolma et al.(2013) HOXA10_1	0.630	0.719
HOXA9 M03086_2.00	Homo sapiens	NDTTWATKRYN	NRYMATWAAHN	SELEX Jolma et al.(2013) HOXA10_2	0.630	0.719
HOXA9 M04932_2.00	Homo sapiens	NNDWWABKRC	GYMVTWWHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_1	0.630	0.719
HOXA9 M04933_2.00	Homo sapiens	NNDTWAYGRB	VYCRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_2	0.630	0.719
HOXB9 M05289_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_1	0.630	0.719
HOXB9 M05290_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_2	0.630	0.719
Hoxa9 M08138_2.00	Mus musculus	TGATTKATKRB	VYMATMAATCA	ChIP-seq Mathelier et al.(2014) MA0594.1	0.630	0.719
HOXA9 M09130_2.00	Homo sapiens	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_HUMAN.H11MO.0.C	0.630	0.719
HOXA9 M09131_2.00	Homo sapiens	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_HUMAN.H11MO.0.B	0.630	0.719
Hoxa9 M09203_2.00	Mus musculus	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_MOUSE.H11MO.0.B	0.630	0.719
Hoxa9 M09575_2.00	Mus musculus	WGATTKATDRBY	RVYHATMAATCW	Misc Heinz et al.(2010) HSC-Hoxa9_GSE33509	0.630	0.719
HOXA9 M10642_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q6	0.630	0.719
HOXA9 M10643_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_04	0.630	0.719
HOXA9 M10644_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5_01	0.630	0.719
HOXA9 M10645_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5	0.630	0.719
HOXB9 M05291_2.00	Homo sapiens	GTCGTAAAHB	VDTTTACGAC	SELEX Yin et al.(2017) HOXB9_eDBD_Methyl-HT-SELEX	0.630	0.719
HOXA9 M04934_2.00	Homo sapiens	NNDTWAYKRC	GYMRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_1	0.630	0.719
HOXA9 M04935_2.00	Homo sapiens	NNDTWACGAY	RTCGTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_2	0.630	0.719
ceh-19 M02180_2.00	Caenorhabditis elegans	NTWAWDRNN	NNYHWTWAN	PBM Weirauch et al.(2014) pTH5661	0.629	0.526
CG34031 M02126_2.00	Drosophila melanogaster	NNNDNNRN	NYNNHNNN	PBM Weirauch et al.(2014) pTH6447	0.629	0.509
CG34031 M06548_2.00	Drosophila melanogaster	TTAATWG	CWATTAA	B1H Mathelier et al.(2014) MA0444.1	0.629	0.509
CG34031 M06372_2.00	Drosophila melanogaster	BTTAATWG	CWATTAAV	B1H Zhu et al.(2011) CG34031_Cell_FBgn0054031	0.629	0.509
CG34031 M06373_2.00	Drosophila melanogaster	NTTAATDR	YHATTAAN	B1H Zhu et al.(2011) CG34031_SOLEXA_FBgn0054031	0.629	0.509
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.626	0.825
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.626	0.825
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.626	0.825
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.626	0.825
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.626	0.825
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.626	0.825
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.626	0.825
Abd-B M00554_2.00	Drosophila melanogaster	NWTWAYDDNN	NNHHRTWAWN	PBM Busser et al.(2012a) Abd-B	0.620	0.632
Abd-B M03772_2.00	Drosophila melanogaster	DRTCRTAAAWH	DWTTTAYGAYH	SELEX Nitta et al.(2015) Abd-B_1	0.620	0.632
Abd-B M03773_2.00	Drosophila melanogaster	DTTTTATKRCY	RGYMATAAAAH	SELEX Nitta et al.(2015) Abd-B_2	0.620	0.632
Abd-B M03774_2.00	Drosophila melanogaster	NKCARYAACGACYW	WRGTCGTTRYTGMN	SELEX Nitta et al.(2015) Abd-B_3	0.620	0.632
Abd-B M03775_2.00	Drosophila melanogaster	DTTTWATGKSTTTY	RAAASMCATWAAAH	SELEX Nitta et al.(2015) Abd-B_4	0.620	0.632
Abd-B M06476_2.00	Drosophila melanogaster	TTTATKR	YMATAAA	B1H Mathelier et al.(2014) MA0165.1	0.620	0.632
Abd-B M06211_2.00	Drosophila melanogaster	YCATAAAA	TTTTATGR	B1H Zhu et al.(2011) Abd-B_FlyReg_FBgn0000015	0.620	0.632
Abd-B M09672_2.00	Drosophila melanogaster	YMATAAAAHH	DDTTTTATKR	Misc Kulakovskiy et al.(2009) Abd-B	0.620	0.632
Abd-B M10779_2.00	Drosophila melanogaster	VSNTTDATKRCNNN	NNNGYMATHAANSB	Transfac Matys et al.(2006) I$ABDB_01	0.620	0.632
Abd-B M10780_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDB_Q6	0.620	0.632
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.619	0.842
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.619	0.842
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.619	0.842
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.619	0.842
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.619	0.842
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.619	0.842
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.619	0.825
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.619	0.825
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.619	0.825
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.619	0.825
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.614	0.825
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.614	0.825
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.614	0.825
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.614	0.825
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.614	0.825
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.614	0.807
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.612	0.807
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.612	0.807
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.612	0.807
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.612	0.807
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.612	0.807
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.612	0.807
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.612	0.807
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.612	0.807
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.608	0.596
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.608	0.596
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.608	0.596
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.608	0.596
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.608	0.596
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.608	0.596
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.608	0.596
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.608	0.596
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.608	0.596
Hoxa10 M00382_2.00	Mus musculus	NHWAYNNNN	NNNNRTWDN	PBM Berger et al.(2008) Hoxa10_2318	0.607	0.684
Hoxc10 M00421_2.00	Mus musculus	TTWATKAB	VTMATWAA	PBM Berger et al.(2008) Hoxc10_2779	0.607	0.684
Hoxd10 M00509_2.00	Mus musculus	NNNNNNNN	NNNNNNNN	PBM Berger et al.(2008) Hoxd10_2368	0.607	0.684
HOXC10 M03228_2.00	Homo sapiens	DTTTWATKDB	VHMATWAAAH	SELEX Jolma et al.(2013) HOXC10_1	0.607	0.684
HOXC10 M03229_2.00	Homo sapiens	NNTTWATKRB	VYMATWAANN	SELEX Jolma et al.(2013) HOXC10_2	0.607	0.684
HOXC10 M03230_2.00	Homo sapiens	NWTTWAYGAB	VTCRTWAAWN	SELEX Jolma et al.(2013) HOXC10_3	0.607	0.684
Hoxc10 M03252_2.00	Mus musculus	DTTTWAYGAY	RTCRTWAAAH	SELEX Jolma et al.(2013) Hoxc10_1	0.607	0.684
Hoxc10 M03253_2.00	Mus musculus	DTTTWATKRY	RYMATWAAAH	SELEX Jolma et al.(2013) Hoxc10_2	0.607	0.684
HOXA10 M05394_2.00	Homo sapiens	RRTCGTAAAAH	DTTTTACGAYY	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_1	0.607	0.684
HOXA10 M05395_2.00	Homo sapiens	NTTTTATKRCY	RGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_2	0.607	0.684
HOXA10 M05398_2.00	Homo sapiens	NRTCRTWAANN	NNTTWAYGAYN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_1	0.607	0.684
HOXA10 M05399_2.00	Homo sapiens	NNTTWATKRCN	NGYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_2	0.607	0.684
HOXC10 M05335_2.00	Homo sapiens	NDTTTATKRCN	NGYMATAAAHN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_1	0.607	0.684
HOXC10 M05336_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_2	0.607	0.684
HOXC10 M05339_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_1	0.607	0.684
HOXC10 M05340_2.00	Homo sapiens	NRTCGTAAAWN	NWTTTACGAYN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_2	0.607	0.684
HOXD10 M05112_2.00	Homo sapiens	NKTTTATKRC	GYMATAAAMN	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_1	0.607	0.684
HOXD10 M05113_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_2	0.607	0.684
HOXD10 M05116_2.00	Homo sapiens	RGTCGTAAAAH	DTTTTACGACY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_1	0.607	0.684
HOXD10 M05117_2.00	Homo sapiens	RRYMATAAAAH	DTTTTATKRYY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_2	0.607	0.684
Hoxa10 M09170_2.00	Mus musculus	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_MOUSE.H11MO.0.C	0.607	0.684
Hoxa10 M10763_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q5	0.607	0.684
HOXD10 M10687_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q2	0.607	0.684
HOXD10 M10688_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q6	0.607	0.684
HOXA10 M05396_2.00	Homo sapiens	NGTCGTAAAWN	NWTTTACGACN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_1	0.607	0.684
HOXA10 M05397_2.00	Homo sapiens	NTTTTATKRCB	VGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_2	0.607	0.684
HOXA10 M05400_2.00	Homo sapiens	NRTCGTWAANN	NNTTWACGAYN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_1	0.607	0.684
HOXA10 M05401_2.00	Homo sapiens	NNTTWATKRYN	NRYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_2	0.607	0.684
HOXC10 M05337_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_1	0.607	0.684
HOXC10 M05338_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_2	0.607	0.684
HOXC10 M05341_2.00	Homo sapiens	DTTTTATKRCH	DGYMATAAAAH	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_1	0.607	0.684
HOXC10 M05342_2.00	Homo sapiens	VGTCGTAAAHN	NDTTTACGACB	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_2	0.607	0.684
HOXD10 M05114_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_1	0.607	0.684
HOXD10 M05115_2.00	Homo sapiens	GTCGTAAAHN	NDTTTACGAC	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_2	0.607	0.684
HOXD10 M05118_2.00	Homo sapiens	VGTCGTAAAAH	DTTTTACGACB	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_1	0.607	0.684
HOXD10 M05119_2.00	Homo sapiens	DGYAATAAAAH	DTTTTATTRCH	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_2	0.607	0.684
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.607	0.737
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.606	0.702
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.606	0.702
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.606	0.702
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.606	0.702
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.606	0.702
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.606	0.702
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.606	0.702
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.606	0.702
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.606	0.702
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.606	0.702
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.606	0.702
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.606	0.702
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.606	0.702
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.606	0.702
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.606	0.702
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.606	0.702
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.606	0.702
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.606	0.702
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.606	0.702
Q9GP48_9TURB M02217_2.00	Discocelis tigrina	DTAATTAB	VTAATTAH	PBM Weirauch et al.(2014) pTH6515	0.606	0.596
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSRNOP00000008542	Homeodomain	156	212	RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK
ENSRNOP00000064985	Homeodomain	156	212	RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK
ENSRNOP00000075013	Homeodomain	156	212	RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK

Links
Other Homeodomain family TFs
Other *Rattus norvegicus* TFs

2255 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACAC_0000977101	Angiostrongylus cantonensis	ACAC_0000977101	I	0.000
ALUE_0001111401	Ascaris lumbricoides	ALUE_0001111401	I	0.000
ANCCAN_26651	Ancylostoma caninum	ANCCAN_26651	I	0.000
ANCDUO_08685	Ancylostoma duodenale	ANCDUO_08685	I	0.000
ANCDUO_13021	Ancylostoma duodenale	ANCDUO_13021	I	0.000
ASIM_0001219601	Anisakis simplex	ASIM_0001219601	I	0.000
ASU_10605	Ascaris suum	ASU_10605	I	0.000
Bm11291	Brugia malayi	Bm11291	I	0.000
Bm5359	Brugia malayi	Bm5359	I	0.000
BTMF_0000952301	Brugia timori	BTMF_0000952301	I	0.000
BXY_1538500	Bursaphelenchus xylophilus	BXY_1538500	I	0.000
CBG09090	Caenorhabditis briggsae	CBG09090	I	0.000
CBN31444	Caenorhabditis brenneri	CBN31444	I	0.000
CGOC_0000897101	Cylicostephanus goldi	CGOC_0000897101	I	0.000
CJA09693	Caenorhabditis japonica	CJA09693	I	0.000
CRE04707	Caenorhabditis remanei	CRE04707	I	0.000
D918_00298	Trichuris suis	D918_00298	I	0.000
DICVIV_05422	Dictyocaulus viviparus	DICVIV_05422	I	0.000
EVEC_0000562301	Enterobius vermicularis	EVEC_0000562301	I	0.000
GPLIN_000764400	Globodera pallida	GPLIN_000764400	I	0.000
GPUH_0001294301	Gongylonema pulchrum	GPUH_0001294301	I	0.000
Hba_14016	Heterorhabditis bacteriophora	Hba_14016	I	0.000
HCOI00557700	Haemonchus contortus	HCOI00557700	N	0.000
HCOI01928500	Haemonchus contortus	HCOI01928500	I	0.000
HelroG76435	Helobdella robusta	HelroG76435	I	0.000
HPBE_0002536701	Heligmosomoides bakeri	HPBE_0002536701	I	0.000
L596_g26024	Steinernema carpocapsae	L596_g26024	I	0.000
L889_g22387	Steinernema feltiae	L889_g22387	I	0.000
L892_g4495	Steinernema scapterisci	L892_g4495	I	0.000
L893_g15056	Steinernema glaseri	L893_g15056	I	0.000
L898_g29067	Steinernema monticolum	L898_g29067	I	0.000
LOAG_05337	Loa loa	LOAG_05337	I	0.000
maker-nMf.1.1.scaf05118-snap-gene-0.7	Meloidogyne floridensis	maker-nMf.1.1.scaf05118-snap-gene-0.7	I	0.000
Minc06316	Meloidogyne incognita	Minc06316	I	0.000
Minc10272	Meloidogyne incognita	Minc10272	I	0.000
nAv.1.0.1.g08553	Acanthocheilonema viteae	nAv.1.0.1.g08553	I	0.000
NBR_0001377901	Nippostrongylus brasiliensis	NBR_0001377901	I	0.000
nDi.2.2.2.g06233	Dirofilaria immitis	nDi.2.2.2.g06233	I	0.000
nLs.2.1.2.g01829	Litomosoides sigmodontis	nLs.2.1.2.g01829	I	0.000
nOo.2.0.1.g06266	Onchocerca ochengi	nOo.2.0.1.g06266	I	0.000
OFLC_0000505301	Onchocerca flexuosa	OFLC_0000505301	I	0.000
Ppa-sma-4	Pristionchus pacificus	PPA17857	I	0.000
PTRK_0001020700	Parastrongyloides trichosuri	PTRK_0001020700	I	0.000
RSKR_0000114900	Rhabditophanes kr3021	RSKR_0000114900	I	0.000
scaffold21-EXSNAP2012.60	Pristionchus exspectatus	scaffold21-EXSNAP2012.60	I	0.000
sma-4	Caenorhabditis elegans	WBGene00004858	D	0.000
SMAD4	Homo sapiens	ENSG00000141646	D	0.000
SMAD4	Pteropus vampyrus	ENSPVAG00000004261	I	0.000
SMAD4	Microcebus murinus	ENSMICG00000017525	I	0.000
SPAL_0001099400	Strongyloides papillosus	SPAL_0001099400	I	0.000
SSTP_0000769000	Strongyloides stercoralis	SSTP_0000769000	I	0.000
SVE_0858500	Strongyloides venezuelensis	SVE_0858500	I	0.000
TCLT_0000412001	Thelazia callipaeda	TCLT_0000412001	I	0.000
TELCIR_06960	Teladorsagia circumcincta	TELCIR_06960	I	0.000
TELCIR_11814	Teladorsagia circumcincta	TELCIR_11814	I	0.000
WBGene00245700	Onchocerca volvulus	WBGene00245700	I	0.000
WUBG_08631	Wuchereria bancrofti	WUBG_08631	I	0.000
YQE_08737	Dendroctonus ponderosae	YQE_08737	I	0.000

LOC100909604 (Rattus norvegicus) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2255 Related TFs

LOC100909604 **(Rattus norvegicus)
Homeodomain**