OPUNC09G11870 (Oryza punctata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OPUNC09G11870 T221782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.851 0.875
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.827 0.768
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.827 0.768
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.817 0.821
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.813 0.821
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.813 0.821
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.813 0.821
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.813 0.821
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.813 0.821
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.813 0.821
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.813 0.821
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.800 0.804
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.800 0.804
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.800 0.804
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.800 0.804
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.756 0.732
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.756 0.732
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.754 0.696
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.754 0.696
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.749 0.643
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.749 0.643
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.689 0.768
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.689 0.768
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.669 0.750
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.669 0.750
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC09G11870.1 Homeodomain 47 102

Links

Other Homeodomain family TFs
Other Oryza punctata TFs

816 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30209.m001510 Ricinus communis 30209.m001510 N 0.000
AARA009718 Anopheles arabiensis AARA009718 N 0.000
ACAC_0000669701 Angiostrongylus cantonensis ACAC_0000669701 N 0.000
ADIR002916 Anopheles dirus ADIR002916 N 0.000
AEPI008543 Anopheles epiroticus AEPI008543 N 0.000
AFAF003697 Anopheles farauti AFAF003697 N 0.000
AFUN006006 Anopheles funestus AFUN006006 N 0.000
AMIN003814 Anopheles minimus AMIN003814 N 0.000
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.000
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.000
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.000
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.000
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.000
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.000
ANCDUO_22747 Ancylostoma duodenale ANCDUO_22747 N 0.000
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.000
ASTEI04299 Anopheles stephensi ASTEI04299 N 0.000
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.000
A_05161 Schistosoma haematobium A_05161 N 0.000
A_08314 Schistosoma haematobium A_08314 N 0.000
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.000
Bo1g117640 Brassica oleracea Bo1g117640 N 0.000
Bo5g118650 Brassica oleracea Bo5g118650 N 0.000
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.000
Bra022316 Brassica rapa Bra022316 N 0.000
Bra037587 Brassica rapa Bra037587 N 0.000
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.000
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.000
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.000
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.000
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.000
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.000
CPIJ015117 Culex quinquefasciatus CPIJ015117 N 0.000
CpipJ_CPIJ015117 Culex pipiens CpipJ_CPIJ015117 N 0.000
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.000
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.000
DME_0000947201 Dracunculus medinensis DME_0000947201 N 0.000
ECPE_0000616401 Echinostoma caproni ECPE_0000616401 N 0.000
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.000
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.000
EVEC_0001374701 Enterobius vermicularis EVEC_0001374701 N 0.000
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N 0.000
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.000
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.000
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.000
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.000
GM19280 Drosophila sechellia FBgn0174180 N 0.000
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.000
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.000
GRMZM2G111204 Zea mays GRMZM2G111204 N 0.000
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.000
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.000
Hba_10254 Heterorhabditis bacteriophora Hba_10254 N 0.000
Hba_19301 Heterorhabditis bacteriophora Hba_19301 N 0.000
HHAL005220-PA Halyomorpha halys HHAL005220-PA N 0.000
L596_g19867 Steinernema carpocapsae L596_g19867 N 0.000
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.000
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.000
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.000
MDP0000268133 Malus domestica MDP0000268133 N 0.000
MDP0000315095 Malus domestica MDP0000315095 N 0.000
mgf014854m Mimulus guttatus mgf014854m N 0.000
Minc14799 Meloidogyne incognita Minc14799 N 0.000
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.000
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.000
NECAME_04746 Necator americanus NECAME_04746 N 0.000
OBART06G15310 Oryza barthii OBART06G15310 N 0.000
Ocbimv22022773m.g Octopus bimaculoides Ocbimv22022773m.g I 0.000
OGLUM06G16330 Oryza glumaepatula OGLUM06G16330 N 0.000
OLONG_009303 Oryza longistaminata OLONG_009303 N 0.000
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.000
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.000
OPUNC06G13910 Oryza punctata OPUNC06G13910 N 0.000
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.000
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.000
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.000
OS06G0485100 Oryza sativa OS06G0485100 N 0.000
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.000
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.000
PK03811.1 Cannabis sativa PK03811.1 N 0.000
Pm011344 Prunus mume Pm011344 N 0.000
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.000
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N 0.000
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.000
PXEA_0000997401 Protopolystoma xenopodis PXEA_0000997401 N 0.000
PXEA_0001530801 Protopolystoma xenopodis PXEA_0001530801 N 0.000
PXEA_0003344501 Protopolystoma xenopodis PXEA_0003344501 N 0.000
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.000
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.000
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.000
scaffold958-EXSNAP2012.2 Pristionchus exspectatus scaffold958-EXSNAP2012.2 N 0.000
SCUD_0000482001 Schistosoma curassoni SCUD_0000482001 I 0.000
SCUD_0001900601 Schistosoma curassoni SCUD_0001900601 N 0.000
Si030167m.g Setaria italica Si030167m.g N 0.000
SMRZ_0000101601 Schistosoma margrebowiei SMRZ_0000101601 N 0.000
SMTD_0000662501 Schistosoma mattheei SMTD_0000662501 N 0.000
SMTD_0001595501 Schistosoma mattheei SMTD_0001595501 N 0.000
SMU15030938 Schmidtea mediterranea SMU15030938 N 0.000
SNAPOd2T00027099001 Oikopleura dioica SNAPOd2T00027099001 N 0.000
snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 Meloidogyne floridensis snap_masked-nMf.1.1.scaf05842-processed-gene-0.7 N 0.000
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.000
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.000
SPER_0002932401 Spirometra erinaceieuropaei SPER_0002932401 N 0.000
TASK_0000266001 Taenia asiatica TASK_0000266001 N 0.000
TCM_046875 Theobroma cacao TCM_046875 N 0.000
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.000
TRE_0000350801 Trichobilharzia regenti TRE_0000350801 N 0.000
TRE_0000664901 Trichobilharzia regenti TRE_0000664901 N 0.000
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.000
TRIUR3_24308 Triticum urartu TRIUR3_24308 N 0.000
TsM_000403100 Taenia solium TsM_000403100 N 0.000
TsM_001096000 Taenia solium TsM_001096000 N 0.000
TTAC_0000456101 Hydatigera taeniaeformis TTAC_0000456101 N 0.000
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.000
WUBG_18725 Wuchereria bancrofti WUBG_18725 N 0.000
YQE_02583 Dendroctonus ponderosae YQE_02583 N 0.000