D915_03318 (Fasciola hepatica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 D915_03318 T233421_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.930
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.930
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.930
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.865 0.930
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.865 0.930
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.930
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.865 0.930
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.930
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.865 0.930
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.930
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.865 0.912
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.865 0.912
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.865 0.912
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.865 0.912
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.865 0.912
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_03318 Homeodomain 408 464

Links

Other Homeodomain family TFs
Other Fasciola hepatica TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011380 Aedes aegypti AAEL011380 N
AAI68534 Xenopus tropicalis AAI68534 N
AALB006743 Anopheles albimanus AALB006743 N
AARA010318 Anopheles arabiensis AARA010318 N
AATE018776 Anopheles atroparvus AATE018776 N
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N
ACEP16613 Atta cephalotes ACEP16613 N
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N
ACUA021022 Anopheles culicifacies ACUA021022 N
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N
ADAC001494 Anopheles darlingi ADAC001494 N
ADIR011701 Anopheles dirus ADIR011701 N
AEPI002924 Anopheles epiroticus AEPI002924 N
AFAF003948 Anopheles farauti AFAF003948 N
AFUN010134 Anopheles funestus AFUN010134 N
AGAP000005 Anopheles gambiae AGAP000005 N
AMAM015540 Anopheles maculatus AMAM015540 N
AMEC021909 Anopheles melas AMEC021909 N
AMEM017336 Anopheles merus AMEM017336 N
AMIN005344 Anopheles minimus AMIN005344 N
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N
ASIS000124 Anopheles sinensis ASIS000124 N
ASU_03902 Ascaris suum ASU_03902 N
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N
A_00070 Schistosoma haematobium A_00070 N
Bm4180 Brugia malayi Bm4180 N
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N
CapteG158220 Capitella teleta CapteG158220 N
CBG17468 Caenorhabditis briggsae CBG17468 N
CBN17977 Caenorhabditis brenneri CBN17977 N
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N
CGI_10023724 Crassostrea gigas CGI_10023724 N
CJA09678 Caenorhabditis japonica CJA09678 N
CJA42049 Caenorhabditis japonica CJA42049 N
CPIJ014043 Culex quinquefasciatus CPIJ014043 N
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N
CRE02943 Caenorhabditis remanei CRE02943 N
csin110255 Clonorchis sinensis csin110255 N
D915_00818 Fasciola hepatica D915_00818 N
D917_01254 Trichinella nativa D917_01254 N
D917_08189 Trichinella nativa D917_08189 N
D918_07195 Trichuris suis D918_07195 N
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N
DME_0001055201 Dracunculus medinensis DME_0001055201 N
Dsp1 Drosophila melanogaster FBgn0011764 N
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N
EFV53345 Trichinella spiralis EFV53345 N
EFV57410 Trichinella spiralis EFV57410 N
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N
GA11488 Drosophila pseudoobscura FBgn0071539 N
GD17278 Drosophila simulans FBgn0188840 N
GE17263 Drosophila yakuba FBgn0234741 N
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N
GF19115 Drosophila ananassae FBgn0096126 N
GG17955 Drosophila erecta FBgn0110175 N
GH12282 Drosophila grimshawi FBgn0119761 N
GI10980 Drosophila mojavensis FBgn0133743 N
GJ19445 Drosophila virilis FBgn0206588 N
GK25058 Drosophila willistoni FBgn0227017 N
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N
HCOI00860100 Haemonchus contortus HCOI00860100 N
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N
HelroG157726 Helobdella robusta HelroG157726 N
HelroG157878 Helobdella robusta HelroG157878 N
HMEL007340 Heliconius melpomene HMEL007340 N
hmg-1.2 Caenorhabditis elegans WBGene00001972 N
hmgb1a Takifugu rubripes ENSTRUG00000008452 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N
HmN_000466000 Hymenolepis microstoma HmN_000466000 N
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N
ISCW017350 Ixodes scapularis ISCW017350 N
L596_g22130 Steinernema carpocapsae L596_g22130 N
L889_g13533 Steinernema feltiae L889_g13533 N
L892_g17551 Steinernema scapterisci L892_g17551 N
L893_g5947 Steinernema glaseri L893_g5947 N
LCUP007363 Lucilia cuprina LCUP007363 N
LDEC006842 Leptinotarsa decemlineata LDEC006842 N
LOAG_04936 Loa loa LOAG_04936 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N
Minc01077 Meloidogyne incognita Minc01077 N
Minc03268 Meloidogyne incognita Minc03268 N
Minc08988 Meloidogyne incognita Minc08988 N
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N
NECAME_09126 Necator americanus NECAME_09126 N
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N
NV15664 Nasonia vitripennis NV15664 N
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N
PHUM006290 Pediculus humanus PHUM006290 N
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N
SINV22586 Solenopsis invicta SINV22586 N
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N
SMAR013695 Strigamia maritima SMAR013695 N
Smp_000980 Schistosoma mansoni Smp_000980 N
Smp_100090 Schistosoma mansoni Smp_100090 N
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N
SMU15027649 Schmidtea mediterranea SMU15027649 N
SMU15030256 Schmidtea mediterranea SMU15030256 N
SMUV_0000232601 Syphacia muris SMUV_0000232601 N
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N
T265_12733 Opisthorchis viverrini T265_12733 N
T265_14643 Opisthorchis viverrini T265_14643 N
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N
TCNE_0000567001 Toxocara canis TCNE_0000567001 N
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N
tetur02g08260 Tetranychus urticae tetur02g08260 N
tetur02g08340 Tetranychus urticae tetur02g08340 N
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N
TsM_000115400 Taenia solium TsM_000115400 N
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N
WUBG_12099 Wuchereria bancrofti WUBG_12099 N
YQE_03203 Dendroctonus ponderosae YQE_03203 N