28694.m000665 (Ricinus communis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 28694.m000665 T246403_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
28694.m000665 LOB 15 113

Links

Other LOB family TFs
Other Ricinus communis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g134830 Brassica oleracea Bo1g134830 N 0.808
Bo5g132010 Brassica oleracea Bo5g132010 N 0.798
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.788
Bra021513 Brassica rapa Bra021513 N 0.808
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.788
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.798
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.970
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.960
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.960
Ca_10077 Cicer arietinum Ca_10077 N 0.818
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.818
Cla015827 Citrullus lanatus Cla015827 N 0.869
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.869
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.828
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.828
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.828
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.808
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.889
GSMUA_Achr3G25850_001 Musa acuminata GSMUA_Achr3G25850_001 N
LBD22 Arabidopsis thaliana AT3G13850 N 0.788
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.788
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.808
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.828
MDP0000257227 Malus domestica MDP0000257227 N 0.899
mgf019664m Mimulus guttatus mgf019664m N 0.788
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.828
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.869
Pm013344 Prunus mume Pm013344 N 0.889
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.889
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.879
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N
TCM_029050 Theobroma cacao TCM_029050 N 0.838
TCM_029052 Theobroma cacao TCM_029052 N 0.879
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.778