Pm027560 (Prunus mume)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pm027560 T261310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm027560 MBD 10 82

Links

Other MBD family TFs
Other Prunus mume TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.808
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.753
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.712
Bo8g066360 Brassica oleracea Bo8g066360 N 0.712
Bra016665 Brassica rapa Bra016665 N 0.712
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.712
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.712
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.824
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.824
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.726
Ca_06682 Cicer arietinum Ca_06682 N 0.836
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.729
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.890
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.793
Cla012423 Citrullus lanatus Cla012423 N 0.740
Cla012920 Citrullus lanatus Cla012920 N 0.757
Cla016961 Citrullus lanatus Cla016961 N 0.726
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.740
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.712
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.740
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.904
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.808
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.822
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.822
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.797
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.808
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.767
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.753
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.767
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.757
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.742
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.754
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.726
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.712
MDP0000152128 Malus domestica MDP0000152128 N 0.973
MDP0000248422 Malus domestica MDP0000248422 N 0.712
MDP0000375866 Malus domestica MDP0000375866 N 0.945
MDP0000574053 Malus domestica MDP0000574053 N 0.973
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.778
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.792
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.778
OBART12G19140 Oryza barthii OBART12G19140 N 0.712
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.712
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.732
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.712
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.732
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.797
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.712
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.712
OS12G0620400 Oryza sativa OS12G0620400 N 0.712
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.746
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.822
PK04144.1 Cannabis sativa PK04144.1 N 0.863
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.810
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.986
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.716
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.808
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.849
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.770
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.822
TCM_038107 Theobroma cacao TCM_038107 N 0.811
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.712
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.753