cassava13512.valid.m1 (Manihot esculenta)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 cassava13512.valid.m1 T261342_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13512.valid.m1 MBD 12 85

Links

Other MBD family TFs
Other Manihot esculenta TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.743
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.743
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 1.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.716
Ca_06682 Cicer arietinum Ca_06682 N 0.797
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.851
Cla012423 Citrullus lanatus Cla012423 N 0.716
Cla012920 Citrullus lanatus Cla012920 N 0.743
Cla016961 Citrullus lanatus Cla016961 N 0.730
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.703
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.716
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.851
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.824
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.838
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.824
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.824
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.838
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.716
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.703
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.743
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.716
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.703
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.703
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.797
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.770
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.743
MDP0000152128 Malus domestica MDP0000152128 N 0.838
MDP0000375866 Malus domestica MDP0000375866 N 0.838
MDP0000574053 Malus domestica MDP0000574053 N 0.838
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.716
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.730
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.716
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.784
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.757
PK04144.1 Cannabis sativa PK04144.1 N 0.797
PK24888.1 Cannabis sativa PK24888.1 N 0.730
Pm027560 Prunus mume Pm027560 N 0.824
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.828
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.838
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.703
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.824
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.865
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.716
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.757
TCM_038107 Theobroma cacao TCM_038107 N 0.811
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.716
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.757