GLYMA16G07927 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA16G07927 T271679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.713 0.785
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.713 0.785
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.692 0.796
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.692 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G07927.1 Myb 183 229
GLYMA16G07927.1 Myb 235 280
GLYMA16G07927.2 Myb 182 228
GLYMA16G07927.2 Myb 234 279

Links

Other Myb/SANT family TFs
Other Glycine max TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29681.m001315 Ricinus communis 29681.m001315 N 0.671
29917.m001977 Ricinus communis 29917.m001977 I 0.693
30147.m013937 Ricinus communis 30147.m013937 I 0.663
Bo1g019910 Brassica oleracea Bo1g019910 I 0.668
Bo2g144970 Brassica oleracea Bo2g144970 I 0.680
Bo3g157300 Brassica oleracea Bo3g157300 I 0.671
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.752
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.668
Bra013346 Brassica rapa Bra013346 I 0.668
Bra020992 Brassica rapa Bra020992 I 0.662
Bra025299 Brassica rapa Bra025299 I 0.718
Bra033027 Brassica rapa Bra033027 I 0.686
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.758
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.668
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.668
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.758
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.687
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.662
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.671
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.667
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.713
Ca_17087 Cicer arietinum Ca_17087 I 0.663
Ca_17294 Cicer arietinum Ca_17294 I 0.670
Ca_19427 Cicer arietinum Ca_19427 I 0.688
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I 0.692
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.663
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.661
Cla010586 Citrullus lanatus Cla010586 I 0.710
Cla019490 Citrullus lanatus Cla019490 I 0.675
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.676
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.687
evm.TU.supercontig_108.29 Carica papaya evm.TU.supercontig_108.29 I 0.710
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.666
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.701
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.712
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.678
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.663
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.834
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.674
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.806
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.663
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.674
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.709
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.714
Lus10039966.g Linum usitatissimum Lus10039966.g I 0.666
MDP0000199939 Malus domestica MDP0000199939 I 0.718
MDP0000215359 Malus domestica MDP0000215359 I 0.663
MDP0000319656 Malus domestica MDP0000319656 I 0.701
mgf024290m Mimulus guttatus mgf024290m I 0.665
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.690
MTR_4g088015 Medicago truncatula MTR_4g088015 I 0.669
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.687
MYB118 Arabidopsis thaliana AT3G27785 D 0.713
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I 0.713
MYB118 Populus trichocarpa POPTR_0001s35140 I 0.681
MYB98 Arabidopsis thaliana AT4G18770 D 0.692
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.675
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.707
orange1.1g044021m.g Citrus sinensis orange1.1g044021m.g I 0.692
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.661
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.663
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.667
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.667
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I 0.689
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.696
Pm000541 Prunus mume Pm000541 I 0.701
Pm015681 Prunus mume Pm015681 I 0.710
Pm024743 Prunus mume Pm024743 I 0.687
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.667
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I 0.666
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.701
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.719
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.687
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.671
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.697
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I 0.689
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.696
TCM_012087 Theobroma cacao TCM_012087 I 0.663
TCM_016909 Theobroma cacao TCM_016909 I 0.769
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.761
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.662
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I 0.717