ar (Xenopus tropicalis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 XB-GENE-479429 T307251_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ar
M00821_2.00 		Mus musculus
NRRGAACAYN
NRTGTTCYYN		 PBM
Weirauch et al.(2013)
pTH1739 		0.992 1.000
AR
M03389_2.00 		Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH		 SELEX
Jolma et al.(2013)
AR_1 		0.992 1.000
AR
M03390_2.00 		Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH		 SELEX
Jolma et al.(2013)
AR_2 		0.992 1.000
Ar
M03436_2.00 		Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN		 SELEX
Jolma et al.(2013)
Ar_1 		0.992 1.000
AR
M09288_2.00 		Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH		 Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A 		0.992 1.000
Ar
M09331_2.00 		Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN		 Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A 		0.992 1.000
AR
M09610_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824 		0.992 1.000
AR
M09609_2.00 		Homo sapiens
SHDRGVACAS
STGTBCYHDS		 Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824 		0.992 1.000
AR
M11157_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_01 		0.992 1.000
AR
M11158_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_02 		0.992 1.000
AR
M11159_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_03 		0.992 1.000
AR
M11160_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_04 		0.992 1.000
AR
M11161_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_11 		0.992 1.000
AR
M11162_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_13 		0.992 1.000
AR
M11163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_14_H 		0.992 1.000
AR
M11164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q2 		0.992 1.000
AR
M11165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6_01 		0.992 1.000
AR
M11166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6 		0.992 1.000
NR3C1
M03366_2.00 		Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN		 SELEX
Jolma et al.(2013)
NR3C1_1 		0.978 0.786
NR3C1
M05587_2.00 		Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX 		0.978 0.786
NR3C1
M07986_2.00 		Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH		 ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha 		0.978 0.786
NR3C1
M07987_2.00 		Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha 		0.978 0.786
NR3C1
M09270_2.00 		Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH		 Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A 		0.978 0.786
NR3C1
M09607_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
A549-GR_GSE32465 		0.978 0.786
NR3C1
M11119_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_01 		0.978 0.786
NR3C1
M11120_2.00 		Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM		 Transfac
Matys et al.(2006)
V$GRE_C 		0.978 0.786
NR3C1
M11121_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q4 		0.978 0.786
NR3C1
M11122_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_01 		0.978 0.786
NR3C1
M11123_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_02 		0.978 0.786
NR3C1
M11124_2.00 		Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN		 Transfac
Matys et al.(2006)
V$GR_Q6 		0.978 0.786
NR3C1
M11125_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR3C1_04 		0.978 0.786
NR3C1
M05588_2.00 		Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX 		0.978 0.786
PGR
M03923_2.00 		Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH		 SELEX
Nitta et al.(2015)
PGR_1 		0.977 0.800
PGR
M09266_2.00 		Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A 		0.977 0.800
Pgr
M09326_2.00 		Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A 		0.977 0.800
PGR
M09603_2.00 		Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY		 Misc
Heinz et al.(2010)
T47D-PR_GSE31130 		0.977 0.800
PGR
M11095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_01 		0.977 0.800
PGR
M11096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_02 		0.977 0.800
PGR
M11097_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_Q6 		0.977 0.800
NR3C2
M02395_2.00 		Homo sapiens
NNRGDACAN
NTGTHCYNN		 PBM
Weirauch et al.(2014)
pTH5924 		0.974 0.771
NR3C2
M03382_2.00 		Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN		 SELEX
Jolma et al.(2013)
NR3C2_1 		0.974 0.771
NR3C2
M05637_2.00 		Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX 		0.974 0.771
NR3C2
M05638_2.00 		Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX 		0.974 0.771
Nr3c1
M05886_2.00 		Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH		 SMiLE-seq
Isakova et al.(2017)
GR 		0.974 0.771
Nr3c1
M09318_2.00 		Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY		 Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A 		0.974 0.771
Nr3c1
M09614_2.00 		Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN		 Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished 		0.974 0.771
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002941888 Nuclear receptor 19 88

Links

Other Nuclear receptor family TFs
Other Xenopus tropicalis TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011684 Calypte anna Aan_R011684 I
Afo_R007636 Aptenodytes forsteri Afo_R007636 I
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I
D917_01243 Trichinella nativa D917_01243 N
D917_08464 Trichinella nativa D917_08464 N
eef2l2 Takifugu rubripes ENSTRUG00000017921 I
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I
Gfo_R007604 Geospiza fortis Gfo_R007604 I
HMG20A Homo sapiens ENSG00000140382 I
HMG20A Pteropus vampyrus ENSPVAG00000003321 N
HMG20A Callithrix jacchus ENSCJAG00000011131 I
HMG20B Felis catus ENSFCAG00000026167 I
HMG20B Cavia porcellus ENSCPOG00000010777 I
HMG20B Tursiops truncatus ENSTTRG00000008832 I
HMG20B Callithrix jacchus ENSCJAG00000003488 I
HMG20B Canis familiaris ENSCAFG00000019215 I
hmg20b Xenopus tropicalis XB-GENE-5809048 I
hmg20b Danio rerio ENSDARG00000042045 I
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I
HMG20B Homo sapiens ENSG00000064961 I
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I
HMG20B Monodelphis domestica ENSMODG00000006884 I
HMG20B Gallus gallus ENSGALG00000027838 I
HMG20B Gorilla gorilla ENSGGOG00000014805 I
HMG20B Loxodonta africana ENSLAFG00000007845 I
HMG20B Meleagris gallopavo ENSMGAG00000001362 I
HMG20B Myotis lucifugus ENSMLUG00000022392 I
HMG20B Taeniopygia guttata ENSTGUG00000000169 I
Hmg20b Mus musculus ENSMUSG00000020232 D
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I
HMG20B Otolemur garnettii ENSOGAG00000014171 I
hmg20b Oryzias latipes ENSORLG00000004640 I
HMG20B Procavia capensis ENSPCAG00000010772 I
HMG20B Pteropus vampyrus ENSPVAG00000004300 I
Hmg20b Rattus norvegicus ENSRNOG00000020601 I
hmg20b.L Xenopus laevis XB-GENE-5809135 I
hmg20b.S Xenopus laevis XB-GENE-17338323 I
LCUP018488 Lucilia cuprina LCUP018488 N
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I
Pvit_08123 Pogona vitticeps Pvit_08123 I
Thaps10374 Thalassiosira pseudonana Thaps10374 N
Thaps1764 Thalassiosira pseudonana Thaps1764 N
Thaps1871 Thalassiosira pseudonana Thaps1871 N