REL (Callithrix jacchus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCJAG00000008975 T317069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REL
M02710_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 SELEX
Mathelier et al.(2014)
MA0101.1 		0.982 0.982
REL
M09350_2.00 		Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B 		0.982 0.982
REL
M11235_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 Transfac
Matys et al.(2006)
V$CREL_01 		0.982 0.982
REL
M11236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREL_Q6 		0.982 0.982
Rel
M09353_2.00 		Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A 		0.929 0.929
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000016444 Rel 10 178
ENSCJAP00000016449 Rel 10 178

Links

Other Rel family TFs
Other Callithrix jacchus TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004749 Ricinus communis 29929.m004749 I
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I
AtMYB40 Arabidopsis thaliana AT5G14340 D
AtMYB40 Vitis vinifera VIT_14s0219g00050 I
AtMYB40 Populus trichocarpa POPTR_0008s18110 I
Bo3g009730 Brassica oleracea Bo3g009730 I
Bo9g166000 Brassica oleracea Bo9g166000 I
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I
Bra006249 Brassica rapa Bra006249 I
Bra008764 Brassica rapa Bra008764 I
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I
cassava15064.m1 Manihot esculenta cassava15064.m1 I
cassava17364.m1 Manihot esculenta cassava17364.m1 I
cassava3745.m1 Manihot esculenta cassava3745.m1 I
Ca_19393 Cicer arietinum Ca_19393 I
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I
Cla004104 Citrullus lanatus Cla004104 I
Cucsa.156340 Cucumis sativus Cucsa.156340 I
estExt_gwp_gw1.C_780109 Physcomitrella patens estExt_gwp_gw1.C_780109 N
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I
GLYMA05G06410 Glycine max GLYMA05G06410 I
GLYMA16G06900 Glycine max GLYMA16G06900 I
GLYMA19G07830 Glycine max GLYMA19G07830 I
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N
Lus10014569.g Linum usitatissimum Lus10014569.g I
Lus10032117.g Linum usitatissimum Lus10032117.g I
MDP0000241111 Malus domestica MDP0000241111 I
MDP0000303239 Malus domestica MDP0000303239 I
mgf018940m Mimulus guttatus mgf018940m I
Pavir.J21364 Panicum virgatum Pavir.J21364 I
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I
Pm015564 Prunus mume Pm015564 I
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I
TCM_017051 Theobroma cacao TCM_017051 I
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I