CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA17191
(
Caenorhabditis japonica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CJA17191
T327070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA17191
Sox
43
106
KMRSTSAYALFFREKQLAEKRAAPYATFGQISQRIAQKWDLLNDQEKKTYKQKCEKNRTRSIVN
Links
Other
Sox
family TFs
Other
Caenorhabditis japonica
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.430
AFUN005717
Anopheles funestus
AFUN005717
N
0.418
ALUE_0000699101
Ascaris lumbricoides
ALUE_0000699101
N
0.464
AMAM014030
Anopheles maculatus
AMAM014030
N
0.430
AMIN005634
Anopheles minimus
AMIN005634
N
0.430
ASIM_0000224701
Anisakis simplex
ASIM_0000224701
N
0.427
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.456
ASU_00726
Ascaris suum
ASU_00726
N
0.464
ASU_00939
Ascaris suum
ASU_00939
N
0.483
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.474
Bm2393
Brugia malayi
Bm2393
N
0.483
BXY_0575000
Bursaphelenchus xylophilus
BXY_0575000
N
0.490
CBG18873
Caenorhabditis briggsae
CBG18873
N
0.536
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.422
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.591
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.422
Contig22304.0.g107
Oxytricha trifallax
Contig22304.0.g107
N
0.459
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.430
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.430
CRE14258
Caenorhabditis remanei
CRE14258
N
0.422
CRE28315
Caenorhabditis remanei
CRE28315
N
0.561
D917_05046
Trichinella nativa
D917_05046
N
0.439
D917_05048
Trichinella nativa
D917_05048
N
0.439
D918_03887
Trichuris suis
D918_03887
N
0.436
D918_05288
Trichuris suis
D918_05288
N
0.466
D918_06015
Trichuris suis
D918_06015
N
0.439
DICVIV_02621
Dictyocaulus viviparus
DICVIV_02621
N
0.489
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.453
EFV52201
Trichinella spiralis
EFV52201
N
0.436
EFV56090
Trichinella spiralis
EFV56090
N
0.439
EFV56095
Trichinella spiralis
EFV56095
N
0.439
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.471
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.464
fgenesh2_pg.scaffold_1690000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1690000001
N
0.456
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.456
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.514
hmg-6
Caenorhabditis elegans
WBGene00009827
N
0.573
HPBE_0002300401
Heligmosomoides bakeri
HPBE_0002300401
N
0.506
HPLM_0002008001
Haemonchus placei
HPLM_0002008001
N
0.482
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.464
ISCW005293
Ixodes scapularis
ISCW005293
N
0.458
ISCW008318
Ixodes scapularis
ISCW008318
N
0.421
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.441
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.430
L892_g13433
Steinernema scapterisci
L892_g13433
I
0.441
LOAG_15875
Loa loa
LOAG_15875
N
0.456
LotgiG176647
Lottia gigantea
LotgiG176647
N
0.420
mgf006762m
Mimulus guttatus
mgf006762m
N
0.437
MhA1_Contig1224.frz3.gene1
Meloidogyne hapla
MhA1_Contig1224.frz3.gene1
N
0.431
NBR_0000051501
Nippostrongylus brasiliensis
NBR_0000051501
N
0.506
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.483
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.483
NECAME_06830
Necator americanus
NECAME_06830
N
0.507
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.483
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.483
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.431
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.443
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.443
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.443
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.526
PHUM393920
Pediculus humanus
PHUM393920
N
0.430
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.459
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.450
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.418
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.468
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.462
SMAR009325
Strigamia maritima
SMAR009325
N
0.459
SMAR010283
Strigamia maritima
SMAR010283
N
0.422
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.483
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.573
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.450
SPU_025140
Strongylocentrotus purpuratus
SPU_025140
N
0.457
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.450
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.433
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.450
SVUK_0000686401
Strongylus vulgaris
SVUK_0000686401
N
0.544
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.483
TCM_014800
Theobroma cacao
TCM_014800
N
0.437
TCNE_0000652201
Toxocara canis
TCNE_0000652201
N
0.464
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.544
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.544
tetur21g01330
Tetranychus urticae
tetur21g01330
N
0.415
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.428
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.428
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.415
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.494
TMUE_s0227000300
Trichuris muris
TMUE_s0227000300
N
0.439
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.498
TOX2
Sorex araneus
ENSSARG00000001080
N
0.464
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.483
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.483