Ca_09578 (Cicer arietinum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ca_09578 T006322_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.847 0.940
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.834 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.834 0.920
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.710 0.820
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.710 0.820
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.681 0.660
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.678 0.820
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.678 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_09578 AP2 12 63

Links

Other AP2 family TFs
Other Cicer arietinum TFs

458 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N
CBN24070 Caenorhabditis brenneri CBN24070 I
CBN16902 Caenorhabditis brenneri CBN16902 I
CBN03440 Caenorhabditis brenneri CBN03440 I
CBN03769 Caenorhabditis brenneri CBN03769 I
CBN04619 Caenorhabditis brenneri CBN04619 I
CBG03688 Caenorhabditis briggsae CBG03688 I
CBG03687 Caenorhabditis briggsae CBG03687 I
CBG20699 Caenorhabditis briggsae CBG20699 I
CBG16375 Caenorhabditis briggsae CBG16375 I
CBG12152 Caenorhabditis briggsae CBG12152 I
nhr-273 Caenorhabditis elegans WBGene00020460 I
nhr-109 Caenorhabditis elegans WBGene00003699 I
nhr-86 Caenorhabditis elegans WBGene00003676 D
nhr-70 Caenorhabditis elegans WBGene00003660 D
nhr-28 Caenorhabditis elegans WBGene00003624 I
nhr-16 Caenorhabditis elegans WBGene00003615 I
nhr-12 Caenorhabditis elegans WBGene00003611 I
CJA10576 Caenorhabditis japonica CJA10576 I
CJA04414 Caenorhabditis japonica CJA04414 I
CRE27659 Caenorhabditis remanei CRE27659 I
CRE27174 Caenorhabditis remanei CRE27174 I
CRE18529 Caenorhabditis remanei CRE18529 I
CRE17355 Caenorhabditis remanei CRE17355 I
CRE17354 Caenorhabditis remanei CRE17354 I
CRE17310 Caenorhabditis remanei CRE17310 I
CRE07801 Caenorhabditis remanei CRE07801 I
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I
NECAME_01500 Necator americanus NECAME_01500 I
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I
PPA10478 Pristionchus pacificus PPA10478 I
PPA08785 Pristionchus pacificus PPA08785 I
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N
L596_g27786 Steinernema carpocapsae L596_g27786 I
L596_g9106 Steinernema carpocapsae L596_g9106 I
L889_g987 Steinernema feltiae L889_g987 I
L889_g9698 Steinernema feltiae L889_g9698 I
L893_g2090 Steinernema glaseri L893_g2090 I
L893_g4569 Steinernema glaseri L893_g4569 I
L893_g9517 Steinernema glaseri L893_g9517 I
L898_g10723 Steinernema monticolum L898_g10723 I
L898_g28806 Steinernema monticolum L898_g28806 I
L892_g8145 Steinernema scapterisci L892_g8145 I
L892_g8144 Steinernema scapterisci L892_g8144 I
L892_g8140 Steinernema scapterisci L892_g8140 I
L892_g10708 Steinernema scapterisci L892_g10708 I
SMUV_0000801801 Syphacia muris SMUV_0000801801 I
SMUV_0000886001 Syphacia muris SMUV_0000886001 I