Gorai.011G235900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.011G235900 T008696_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.714 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G235900.1 AP2 71 122

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.731
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.688
Bo2g016490 Brassica oleracea Bo2g016490 I 0.697
Bo4g190040 Brassica oleracea Bo4g190040 I 0.703
Bra017011 Brassica rapa Bra017011 I 0.703
Bra023674 Brassica rapa Bra023674 I 0.697
PK07829.1 Cannabis sativa PK07829.1 I 0.703
PK07402.1 Cannabis sativa PK07402.1 D 0.714
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.730
Cla001755 Citrullus lanatus Cla001755 I 0.715
Cla006713 Citrullus lanatus Cla006713 I 0.708
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.679
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.679
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.715
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.709
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.708
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.681
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.723
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.696
Gorai.013G025100 Gossypium raimondii Gorai.013G025100 N 0.721
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.684
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.736
Lus10002855.g Linum usitatissimum Lus10002855.g N 0.691
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.736
MDP0000147009 Malus domestica MDP0000147009 I 0.691
MDP0000165880 Malus domestica MDP0000165880 I 0.704
MDP0000290585 Malus domestica MDP0000290585 I 0.725
MDP0000446783 Malus domestica MDP0000446783 I 0.691
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.707
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.711
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.695
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.695
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.684
OBART01G04210 Oryza barthii OBART01G04210 I 0.677
OB01G13930 Oryza brachyantha OB01G13930 I 0.677
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.677
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.677
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.677
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.677
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.677
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.677
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.677
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.677
DREB2A Oryza sativa OS01G0165000 I 0.677
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.692
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.691
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.705
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.708
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.698
Pm015262 Prunus mume Pm015262 I 0.749
Pm018989 Prunus mume Pm018989 I 0.691
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.725
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.691
29729.m002292 Ricinus communis 29729.m002292 I 0.719
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.681
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.693
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.706
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.693
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.706
Si002067m.g Setaria italica Si002067m.g I 0.699
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.679
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.677
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.677
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.690
TCM_043302 Theobroma cacao TCM_043302 I 0.779
TCM_043306 Theobroma cacao TCM_043306 I 0.779
TCM_043275 Theobroma cacao TCM_043275 I 0.741
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.700