Lus10003740.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10003740.g T008735_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.940
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003740 AP2 34 85

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19761 Aegilops tauschii F775_19761 N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N 0.000
NAC090 Arabidopsis thaliana AT5G22380 N 0.000
Bostr.26527s0039 Boechera stricta Bostr.26527s0039 N 0.000
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.000
Bo2g023870 Brassica oleracea Bo2g023870 N 0.000
Bo3g016870 Brassica oleracea Bo3g016870 N 0.000
Bo9g148540 Brassica oleracea Bo9g148540 N 0.000
Bra002408 Brassica rapa Bra002408 N 0.000
Bra006624 Brassica rapa Bra006624 N 0.000
Bra020188 Brassica rapa Bra020188 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
Cagra.0846s0014 Capsella grandiflora Cagra.0846s0014 N 0.000
Carubv10001788m.g Capsella rubella Carubv10001788m.g N 0.000
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
Ca_00818 Cicer arietinum Ca_00818 N 0.000
Ca_15160 Cicer arietinum Ca_15160 N 0.000
Cla003087 Citrullus lanatus Cla003087 I 0.000
Cla008777 Citrullus lanatus Cla008777 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.000
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N 0.000
Eucgr.I00583 Eucalyptus grandis Eucgr.I00583 N 0.000
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N 0.000
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N 0.000
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N 0.000
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N 0.000
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N 0.000
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N 0.000
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N 0.000
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N 0.000
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.000
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.000
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.000
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N 0.000
Thhalv10014563m.g Eutrema salsugineum Thhalv10014563m.g N 0.000
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.000
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
GLYMA12G09670 Glycine max GLYMA12G09670 N 0.000
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.000
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N 0.000
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N 0.000
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.000
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.000
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.000
LPERR12G03220 Leersia perrieri LPERR12G03220 N 0.000
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.000
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.000
Lus10029410.g Linum usitatissimum Lus10029410.g N 0.000
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15680.m1 Manihot esculenta cassava15680.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.000
MTR_2g086690 Medicago truncatula MTR_2g086690 N 0.000
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.000
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
mgf024293m Mimulus guttatus mgf024293m N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
OBART01G38190 Oryza barthii OBART01G38190 N 0.000
OBART11G03530 Oryza barthii OBART11G03530 N 0.000
OBART12G03440 Oryza barthii OBART12G03440 N 0.000
OB11G12830 Oryza brachyantha OB11G12830 N 0.000
OB12G13350 Oryza brachyantha OB12G13350 N 0.000
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.000
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.000
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.000
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.000
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.000
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.000
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.000
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.000
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.000
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.000
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.000
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.000
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.000
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.000
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.000
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.000
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.000
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.000
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.000
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.000
OS01G0862800 Oryza sativa OS01G0862800 N 0.000
OS11G0154500 Oryza sativa OS11G0154500 N 0.000
OS12G0156100 Oryza sativa OS12G0156100 N 0.000
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.000
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.000
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.000
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.000
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.000
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.000
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N 0.000
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N 0.000
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.000
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
Pm001404 Prunus mume Pm001404 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
PRUPE_ppa025103mg Prunus persica PRUPE_ppa025103mg N 0.000
28629.m000575 Ricinus communis 28629.m000575 N 0.000
30032.m000479 Ricinus communis 30032.m000479 N 0.000
30055.m001588 Ricinus communis 30055.m001588 N 0.000
SapurV1A.0450s0140 Salix purpurea SapurV1A.0450s0140 N 0.000
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
SapurV1A.1671s0050 Salix purpurea SapurV1A.1671s0050 N 0.000
SapurV1A.3648s0010 Salix purpurea SapurV1A.3648s0010 N 0.000
Si002586m.g Setaria italica Si002586m.g N 0.000
Si025833m.g Setaria italica Si025833m.g N 0.000
Si026707m.g Setaria italica Si026707m.g N 0.000
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.000
TCM_022676 Theobroma cacao TCM_022676 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
TCM_041364 Theobroma cacao TCM_041364 N 0.000
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.000
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.000
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N 0.000
VIT_18s0041g00700 Vitis vinifera VIT_18s0041g00700 N 0.000
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.000
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.000
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.000