Thhalv10019474m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10019474m.g T009964_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019474m AP2 130 181

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.820
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.843
ERF084 Arabidopsis thaliana AT1G80580 N 0.843
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.843
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.693
Bo2g095830 Brassica oleracea Bo2g095830 N 0.831
Bra008460 Brassica rapa Bra008460 N 0.866
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.843
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.843
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.833
Ca_20041 Cicer arietinum Ca_20041 I 0.833
Cla015583 Citrullus lanatus Cla015583 I 0.833
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.833
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.833
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.833
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.812
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.879
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.824
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.832
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.826
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.813
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.825
LPERR03G32900 Leersia perrieri LPERR03G32900 I 0.684
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.797
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.804
MDP0000264187 Malus domestica MDP0000264187 I 0.832
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.826
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.833
mgf023662m Mimulus guttatus mgf023662m I 0.833
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.701
GSMUA_Achr5G27850_001 Musa acuminata GSMUA_Achr5G27850_001 I 0.684
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.694
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.704
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.716
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.716
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.716
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.716
OS05G0316800 Oryza sativa OS05G0316800 N 0.716
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.677
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.677
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.677
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.783
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.782
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.765
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.771
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.782
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.779
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.734
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.819
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.733
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.826
Pm013734 Prunus mume Pm013734 I 0.832
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.826
27446.m000475 Ricinus communis 27446.m000475 I 0.826
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.826
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.826
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.782
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.791
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.791
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.782
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.714
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.678
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.813
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.777
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.709
TCM_027348 Theobroma cacao TCM_027348 I 0.827
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.833