GLYMA07G21160 (Glycine max)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GLYMA07G21160 T019268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.729 0.729
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G21160.1 B3 5 98
GLYMA07G21160.1 B3 300 395
GLYMA07G21160.2 B3 5 98
GLYMA07G21160.2 B3 331 426
GLYMA07G21160.3 B3 218 313
GLYMA07G21160.4 B3 218 313
GLYMA07G21160.5 B3 218 313

Links

Other B3 family TFs
Other Glycine max TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RTV1 Arabidopsis lyrata scaffold_104641.1 I 0.719
REM19 Arabidopsis thaliana AT1G49480 D 0.729
Bostr.26675s0223 Boechera stricta Bostr.26675s0223 I 0.719
Bo5g076230 Brassica oleracea Bo5g076230 I 0.737
Bra032286 Brassica rapa Bra032286 I 0.737
Bra014192 Brassica rapa Bra014192 I 0.729
PK10791.1 Cannabis sativa PK10791.1 I 0.757
Cagra.4084s0003 Capsella grandiflora Cagra.4084s0003 I 0.719
Carubv10010224m.g Capsella rubella Carubv10010224m.g I 0.719
Ca_14825 Cicer arietinum Ca_14825 N 0.816
Ca_13671 Cicer arietinum Ca_13671 N 0.741
Thhalv10012062m.g Eutrema salsugineum Thhalv10012062m.g I 0.719
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.737
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.784
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.968
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.778
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.716
Gorai.013G039800 Gossypium raimondii Gorai.013G039800 I 0.792
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.720
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.713
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.732
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.707
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.879
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.862
chr3.LjT23H01.130.nc Lotus japonicus chr3.LjT23H01.130.nc N 0.751
MDP0000238744 Malus domestica MDP0000238744 N 0.753
MDP0000555456 Malus domestica MDP0000555456 N 0.737
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.721
MTR_4g068320 Medicago truncatula MTR_4g068320 N 0.704
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.810
MTR_1g034210 Medicago truncatula MTR_1g034210 N 0.750
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.705
Pm021537 Prunus mume Pm021537 N 0.786
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.779
29851.m002498 Ricinus communis 29851.m002498 I 0.720
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.823
TCM_006971 Theobroma cacao TCM_006971 I 0.745