Pavir.J18766 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J18766 T028589_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18766.1.p BED ZF 4 48

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN17580 Caenorhabditis brenneri CBN17580 N
CBN00299 Caenorhabditis brenneri CBN00299 I
CBG01352 Caenorhabditis briggsae CBG01352 I
CBG01250 Caenorhabditis briggsae CBG01250 D
CBG19144 Caenorhabditis briggsae CBG19144 I
CBG17898 Caenorhabditis briggsae CBG17898 I
CBG06614 Caenorhabditis briggsae CBG06614 I
CBG06387 Caenorhabditis briggsae CBG06387 I
CBG01357 Caenorhabditis briggsae CBG01357 N
nhr-98 Caenorhabditis elegans WBGene00003688 I
WBGene00003673 Caenorhabditis elegans WBGene00003673 I
nhr-55 Caenorhabditis elegans WBGene00003645 I
nhr-117 Caenorhabditis elegans WBGene00003707 I
nhr-123 Caenorhabditis elegans WBGene00003713 I
nhr-99 Caenorhabditis elegans WBGene00003689 I
nhr-130 Caenorhabditis elegans WBGene00003720 I
nhr-133 Caenorhabditis elegans WBGene00003723 I
nhr-230 Caenorhabditis elegans WBGene00012446 N
nhr-177 Caenorhabditis elegans WBGene00017503 D
nhr-182 Caenorhabditis elegans WBGene00018265 D
nhr-190 Caenorhabditis elegans WBGene00018622 I
nhr-201 Caenorhabditis elegans WBGene00019741 I
nhr-202 Caenorhabditis elegans WBGene00019742 I
nhr-203 Caenorhabditis elegans WBGene00019743 N
CJA19466 Caenorhabditis japonica CJA19466 I
CRE14845 Caenorhabditis remanei CRE14845 I
CRE18428 Caenorhabditis remanei CRE18428 I
CRE16082 Caenorhabditis remanei CRE16082 I
CRE09227 Caenorhabditis remanei CRE09227 N
CRE09225 Caenorhabditis remanei CRE09225 N
CRE09224 Caenorhabditis remanei CRE09224 N
CRE09222 Caenorhabditis remanei CRE09222 I
CRE08755 Caenorhabditis remanei CRE08755 I
CRE08754 Caenorhabditis remanei CRE08754 I
CRE08753 Caenorhabditis remanei CRE08753 I
CRE08749 Caenorhabditis remanei CRE08749 I
CRE05779 Caenorhabditis remanei CRE05779 I
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I