CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TAL1
(
Callithrix jacchus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSCJAG00000021222
T033378_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TAL1
M08734_2.00
Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV
Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A
0.914
1.000
Tal1
M08759_2.00
Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV
Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A
0.914
1.000
Tal1
M09471_2.00
Mus musculus
NVCWKMWG
CWKMWGBN
Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511
0.914
1.000
Tal1
M09472_2.00
Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR
Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720
0.914
1.000
TAL1
M09870_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_01
0.914
1.000
TAL1
M09871_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6_01
0.914
1.000
TAL1
M09872_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6
0.914
1.000
LYL1
M08714_2.00
Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB
Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A
0.888
0.885
Lyl1
M08763_2.00
Mus musculus
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB
Misc
Kulakovskiy et al.(2013)
LYL1_MOUSE.H11MO.0.A
0.853
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000039521
bHLH
178
230
RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
ENSCJAP00000039525
bHLH
190
242
RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
Links
Other
bHLH
family TFs
Other
Callithrix jacchus
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010582
Ailuropoda melanoleuca
ENSAMEG00000010582
I
ENSAMEG00000011453
Ailuropoda melanoleuca
ENSAMEG00000011453
I
Alligator_sinensis_CCG010967.1
Alligator sinensis
Alligator_sinensis_CCG010967.1
I
ENSAPLG00000014264
Anas platyrhynchos
ENSAPLG00000014264
I
LIN28B
Anolis carolinensis
ENSACAG00000003957
I
ENSACAG00000017764
Anolis carolinensis
ENSACAG00000017764
I
Afo_R003680
Aptenodytes forsteri
Afo_R003680
I
Afo_R008930
Aptenodytes forsteri
Afo_R008930
I
ENSAMXG00000001433
Astyanax mexicanus
ENSAMXG00000001433
I
ENSAMXG00000001573
Astyanax mexicanus
ENSAMXG00000001573
I
ENSAMXG00000001888
Astyanax mexicanus
ENSAMXG00000001888
I
ENSAMXG00000016813
Astyanax mexicanus
ENSAMXG00000016813
I
ENSBTAP00000004196-D2
Bos grunniens
ENSBTAP00000004196-D2
I
ENSBTAP00000053651-D1
Bos grunniens
ENSBTAP00000053651-D1
I
yakA12818
Bos grunniens
yakA12818
I
yakG040859
Bos grunniens
yakG040859
I
ENSBTAG00000040497
Bos taurus
ENSBTAG00000040497
I
LIN28B
Bos taurus
ENSBTAG00000043973
I
ENSBTAG00000048256
Bos taurus
ENSBTAG00000048256
I
Brh_R006709
Buceros rhinoceros
Brh_R006709
I
LIN28B
Callithrix jacchus
ENSCJAG00000001671
I
LIN28A
Callithrix jacchus
ENSCJAG00000009796
I
ENSCJAG00000016916
Callithrix jacchus
ENSCJAG00000016916
I
ENSCJAG00000021979
Callithrix jacchus
ENSCJAG00000021979
I
ENSCJAG00000022770
Callithrix jacchus
ENSCJAG00000022770
I
Aan_R002277
Calypte anna
Aan_R002277
I
Aan_R005866
Calypte anna
Aan_R005866
I
Aan_R007025
Calypte anna
Aan_R007025
I
LIN28B
Canis familiaris
ENSCAFG00000003598
I
LIN28A
Canis familiaris
ENSCAFG00000012488
I
LIN28B
Cavia porcellus
ENSCPOG00000006178
I
ENSCPOG00000024027
Cavia porcellus
ENSCPOG00000024027
I
Cmyd_10009744
Chelonia mydas
Cmyd_10009744
I
Cmyd_10021069
Chelonia mydas
Cmyd_10021069
I
ENSCSAG00000000975
Chlorocebus sabaeus
ENSCSAG00000000975
I
ENSCSAG00000014708
Chlorocebus sabaeus
ENSCSAG00000014708
I
LIN28B
Choloepus hoffmanni
ENSCHOG00000001682
I
LIN28A
Choloepus hoffmanni
ENSCHOG00000002073
I
LIN28A
Danio rerio
ENSDARG00000004328
I
lin28a
Danio rerio
ENSDARG00000016999
I
lin28b
Danio rerio
ENSDARG00000052511
I
LIN28A
Dasypus novemcinctus
ENSDNOG00000010710
I
LIN28B
Dasypus novemcinctus
ENSDNOG00000015300
I
LIN28B
Echinops telfairi
ENSETEG00000015340
I
LIN28A
Equus caballus
ENSECAG00000020267
I
LIN28B
Equus caballus
ENSECAG00000020994
I
LIN28B
Erinaceus europaeus
ENSEEUG00000003632
I
LIN28A
Erinaceus europaeus
ENSEEUG00000012085
I
LIN28B
Felis catus
ENSFCAG00000005058
I
LIN28A
Felis catus
ENSFCAG00000012810
I
ENSFALG00000000374
Ficedula albicollis
ENSFALG00000000374
I
ENSFALG00000011574
Ficedula albicollis
ENSFALG00000011574
I
ENSGMOG00000010704
Gadus morhua
ENSGMOG00000010704
I
ENSGMOG00000015523
Gadus morhua
ENSGMOG00000015523
I
ENSGMOG00000015660
Gadus morhua
ENSGMOG00000015660
I
ENSGALG00000000388
Gallus gallus
ENSGALG00000000388
I
LIN28B
Gallus gallus
ENSGALG00000026761
I
lin28a
Gasterosteus aculeatus
ENSGACG00000007826
I
LIN28B
Gasterosteus aculeatus
ENSGACG00000009428
I
si:ch1073-284b18.2
Gasterosteus aculeatus
ENSGACG00000013893
I
Gfo_R011576
Geospiza fortis
Gfo_R011576
I
Gfo_R012200
Geospiza fortis
Gfo_R012200
I
LIN28B
Gorilla gorilla
ENSGGOG00000015437
I
LIN28A
Gorilla gorilla
ENSGGOG00000024918
I
LIN28A
Homo sapiens
ENSG00000131914
I
LIN28B
Homo sapiens
ENSG00000187772
D
ENSSTOG00000002692
Ictidomys tridecemlineatus
ENSSTOG00000002692
I
ENSSTOG00000004329
Ictidomys tridecemlineatus
ENSSTOG00000004329
I
ENSLACG00000002747
Latimeria chalumnae
ENSLACG00000002747
I
ENSLACG00000004053
Latimeria chalumnae
ENSLACG00000004053
I
ENSLOCG00000003353
Lepisosteus oculatus
ENSLOCG00000003353
I
ENSLOCG00000016539
Lepisosteus oculatus
ENSLOCG00000016539
I
LIN28A
Loxodonta africana
ENSLAFG00000017525
I
LIN28B
Loxodonta africana
ENSLAFG00000017788
I
ENSMMUP00000018998
Macaca fascicularis
ENSMMUP00000018998
I
LIN28B
Macaca mulatta
ENSMMUG00000014470
I
ENSMMUG00000032211
Macaca mulatta
ENSMMUG00000032211
I
ENSMEUG00000008743
Macropus eugenii
ENSMEUG00000008743
I
LIN28A
Meleagris gallopavo
ENSMGAG00000009456
I
LIN28B
Meleagris gallopavo
ENSMGAG00000013531
I
ENSMICG00000002297
Microcebus murinus
ENSMICG00000002297
I
LIN28A
Monodelphis domestica
ENSMODG00000014236
I
LIN28B
Monodelphis domestica
ENSMODG00000018035
I
ENSMPUG00000009489
Mustela putorius furo
ENSMPUG00000009489
I
ENSMPUG00000015724
Mustela putorius furo
ENSMPUG00000015724
I
Lin28a
Mus musculus
ENSMUSG00000050966
I
Lin28b
Mus musculus
ENSMUSG00000063804
I
Myotis_brandtii_Lin28a_10029661
Myotis brandtii
Myotis_brandtii_Lin28a_10029661
I
Myotis_brandtii_LIN28B_10034705
Myotis brandtii
Myotis_brandtii_LIN28B_10034705
I
LIN28B
Myotis lucifugus
ENSMLUG00000006883
I
ENSMLUG00000010158
Myotis lucifugus
ENSMLUG00000010158
I
ENSNLEG00000009294
Nomascus leucogenys
ENSNLEG00000009294
I
ENSNLEG00000014146
Nomascus leucogenys
ENSNLEG00000014146
I
LIN28A
Ochotona princeps
ENSOPRG00000001591
I
LIN28B
Ochotona princeps
ENSOPRG00000006333
I
Ogr09706
Ophisaurus gracilis
Ogr09706
I
Ogr14286
Ophisaurus gracilis
Ogr14286
I
ENSONIG00000014706
Oreochromis niloticus
ENSONIG00000014706
I
ENSONIG00000016204
Oreochromis niloticus
ENSONIG00000016204
I
LIN28B
Ornithorhynchus anatinus
ENSOANG00000010299
I
ENSOCUG00000000299
Oryctolagus cuniculus
ENSOCUG00000000299
I
ENSOCUG00000011640
Oryctolagus cuniculus
ENSOCUG00000011640
I
LIN28B
Oryctolagus cuniculus
ENSOCUG00000017850
I
ENSOCUG00000027473
Oryctolagus cuniculus
ENSOCUG00000027473
I
ENSOCUG00000027786
Oryctolagus cuniculus
ENSOCUG00000027786
I
LIN28B
Oryzias latipes
ENSORLG00000012891
I
si:ch1073-284b18.2
Oryzias latipes
ENSORLG00000014369
I
LIN28A
Otolemur garnettii
ENSOGAG00000003971
I
LIN28B
Otolemur garnettii
ENSOGAG00000011042
I
ENSOARG00000003913
Ovis aries
ENSOARG00000003913
I
ENSOARG00000004614
Ovis aries
ENSOARG00000004614
I
ENSOARG00000011404
Ovis aries
ENSOARG00000011404
I
LIN28A
Pan troglodytes
ENSPTRG00000000384
I
LIN28B
Pan troglodytes
ENSPTRG00000018453
I
ENSPANG00000005196
Papio anubis
ENSPANG00000005196
I
ENSPANG00000009841
Papio anubis
ENSPANG00000009841
I
ENSPSIG00000002635
Pelodiscus sinensis
ENSPSIG00000002635
I
ENSPSIG00000018001
Pelodiscus sinensis
ENSPSIG00000018001
I
ENSPFOG00000014054
Poecilia formosa
ENSPFOG00000014054
I
ENSPFOG00000019352
Poecilia formosa
ENSPFOG00000019352
I
Pvit_09294
Pogona vitticeps
Pvit_09294
I
Pvit_17184
Pogona vitticeps
Pvit_17184
I
ENSPPYG00000001684
Pongo abelii
ENSPPYG00000001684
I
ENSPPYG00000016875
Pongo abelii
ENSPPYG00000016875
I
LIN28B
Pteropus vampyrus
ENSPVAG00000008797
I
LIN28A
Pteropus vampyrus
ENSPVAG00000017267
I
Lin28b
Rattus norvegicus
ENSRNOG00000025938
I
Lin28a
Rattus norvegicus
ENSRNOG00000060320
I
ENSSHAG00000012434
Sarcophilus harrisii
ENSSHAG00000012434
I
ENSSHAG00000012716
Sarcophilus harrisii
ENSSHAG00000012716
I
LIN28B
Sorex araneus
ENSSARG00000008374
I
LIN28A
Sus scrofa
ENSSSCG00000003557
I
ENSSSCG00000004365
Sus scrofa
ENSSSCG00000004365
I
ENSTGUG00000001037
Taeniopygia guttata
ENSTGUG00000001037
I
LIN28B
Taeniopygia guttata
ENSTGUG00000012225
I
si:ch1073-284b18.2
Takifugu rubripes
ENSTRUG00000006069
I
LIN28B
Takifugu rubripes
ENSTRUG00000008428
I
lin28a
Takifugu rubripes
ENSTRUG00000009454
I
ENSTSYG00000006480
Tarsius syrichta
ENSTSYG00000006480
I
ENSTSYG00000011513
Tarsius syrichta
ENSTSYG00000011513
I
lin28a
Tetraodon nigroviridis
ENSTNIG00000009802
I
LIN28B
Tetraodon nigroviridis
ENSTNIG00000012302
I
LIN28A
Tursiops truncatus
ENSTTRG00000005678
I
LIN28B
Tursiops truncatus
ENSTTRG00000014919
I
Tal_R007754
Tyto alba
Tal_R007754
I
ENSVPAG00000008073
Vicugna pacos
ENSVPAG00000008073
I
lin28b.S
Xenopus laevis
XB-GENE-1218973
I
lin28a.S
Xenopus laevis
XB-GENE-866059
I
lin28b
Xenopus tropicalis
XB-GENE-1218969
I
lin28a
Xenopus tropicalis
XB-GENE-491384
I
ENSXMAG00000003450
Xiphophorus maculatus
ENSXMAG00000003450
I
ENSXMAG00000014593
Xiphophorus maculatus
ENSXMAG00000014593
I