Ogr11551 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr11551 T047534_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 0.962
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 0.962
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 0.962
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 0.962
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr11551 bHLH 105 157

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I
Aquca_006_00387 Aquilegia coerulea Aquca_006_00387 I
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I
BIM1 Arabidopsis lyrata scaffold_600819.1 I
BIM3 Arabidopsis lyrata scaffold_704174.1 I
BIM2 Arabidopsis thaliana AT1G69010 D
BIM1 Arabidopsis thaliana AT5G08130 D
BIM3 Arabidopsis thaliana AT5G38860 D
ALC Arabidopsis thaliana AT5G67110 I
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I
Bo2g062560 Brassica oleracea Bo2g062560 I
Bo2g161110 Brassica oleracea Bo2g161110 I
Bo3g004690 Brassica oleracea Bo3g004690 I
Bo5g020460 Brassica oleracea Bo5g020460 I
Bo6g108530 Brassica oleracea Bo6g108530 I
Bo9g174770 Brassica oleracea Bo9g174770 I
Bra004355 Brassica rapa Bra004355 I
Bra005969 Brassica rapa Bra005969 I
Bra009322 Brassica rapa Bra009322 I
Bra012133 Brassica rapa Bra012133 I
Bra029354 Brassica rapa Bra029354 I
Bra038332 Brassica rapa Bra038332 I
PK00238.1 Cannabis sativa PK00238.1 I
PK01364.1 Cannabis sativa PK01364.1 I
PK10562.1 Cannabis sativa PK10562.1 I
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I
Cagra.2539s0002 Capsella grandiflora Cagra.2539s0002 I
Carubv10000655m.g Capsella rubella Carubv10000655m.g I
Carubv10006445m.g Capsella rubella Carubv10006445m.g I
Carubv10020679m.g Capsella rubella Carubv10020679m.g I
Carubv10028570m.g Capsella rubella Carubv10028570m.g I
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I
Ca_19269 Cicer arietinum Ca_19269 I
Ca_22043 Cicer arietinum Ca_22043 I
Cla018818 Citrullus lanatus Cla018818 I
Cla022382 Citrullus lanatus Cla022382 I
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I
Cucsa.113490 Cucumis sativus Cucsa.113490 I
Cucsa.174600 Cucumis sativus Cucsa.174600 I
Cucsa.198520 Cucumis sativus Cucsa.198520 I
Cucsa.328060 Cucumis sativus Cucsa.328060 I
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I
GLYMA01G09010 Glycine max GLYMA01G09010 I
GLYMA02G13670 Glycine max GLYMA02G13670 I
GLYMA05G07490 Glycine max GLYMA05G07490 I
GLYMA08G28010 Glycine max GLYMA08G28010 I
GLYMA17G08980 Glycine max GLYMA17G08980 I
GLYMA18G51080 Glycine max GLYMA18G51080 I
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I
LPERR04G17400 Leersia perrieri LPERR04G17400 I
LPERR06G03910 Leersia perrieri LPERR06G03910 I
Lus10004630.g Linum usitatissimum Lus10004630.g I
Lus10026684.g Linum usitatissimum Lus10026684.g I
Lus10034358.g Linum usitatissimum Lus10034358.g I
MDP0000261293 Malus domestica MDP0000261293 I
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I
MTR_1g019240 Medicago truncatula MTR_1g019240 I
MTR_4g110040 Medicago truncatula MTR_4g110040 I
MTR_5g048350 Medicago truncatula MTR_5g048350 I
MTR_7g017320 Medicago truncatula MTR_7g017320 I
mgf001137m Mimulus guttatus mgf001137m I
mgf005849m Mimulus guttatus mgf005849m I
mgf011829m Mimulus guttatus mgf011829m I
mgf013208m Mimulus guttatus mgf013208m I
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I
OBART06G04330 Oryza barthii OBART06G04330 I
OB08G25940 Oryza brachyantha OB08G25940 I
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I
BGIOSGA022375 Oryza indica BGIOSGA022375 I
BGIOSGA028888 Oryza indica BGIOSGA028888 I
OLONG_003583 Oryza longistaminata OLONG_003583 I
OMERI06G05430 Oryza meridionalis OMERI06G05430 I
ONIVA06G05510 Oryza nivara ONIVA06G05510 I
ONIVA08G20800 Oryza nivara ONIVA08G20800 I
OPUNC08G16820 Oryza punctata OPUNC08G16820 I
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I
OS08G0490000 Oryza sativa OS08G0490000 I
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I
Pavir.J15575 Panicum virgatum Pavir.J15575 I
Pavir.J38250 Panicum virgatum Pavir.J38250 I
Pavir.J38910 Panicum virgatum Pavir.J38910 I
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I
29790.m000843 Ricinus communis 29790.m000843 I
30138.m003899 Ricinus communis 30138.m003899 I
30138.m003913 Ricinus communis 30138.m003913 I
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I
Si000845m.g Setaria italica Si000845m.g I
Si012401m.g Setaria italica Si012401m.g I
Si013622m.g Setaria italica Si013622m.g I
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I
Sb06g025040 Sorghum bicolor Sb06g025040 I
Sb06g025060 Sorghum bicolor Sb06g025060 I
Sb07g028860 Sorghum bicolor Sb07g028860 I
Sb10g004500 Sorghum bicolor Sb10g004500 I
TCM_011433 Theobroma cacao TCM_011433 I
TCM_014392 Theobroma cacao TCM_014392 I
TCM_019015 Theobroma cacao TCM_019015 I
Traes_7DL_04FC0BF21 Triticum aestivum Traes_7DL_04FC0BF21 N
BIM2 Vitis vinifera VIT_01s0010g00540 I
BIM3 Vitis vinifera VIT_14s0083g00930 I
BIM1 Vitis vinifera VIT_17s0000g04790 I
GRMZM2G017349 Zea mays GRMZM2G017349 I
GRMZM2G172795 Zea mays GRMZM2G172795 I