Pavir.Cb00258 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Cb00258 T072350_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.789 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb00258.1.p bZIP 123 185

Links

Other bZIP family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_030_00013 Aquilegia coerulea Aquca_030_00013 I 0.000
anac053 Arabidopsis lyrata fgenesh2_kg.3__1085__AT3G10500.1 I 0.000
NAC2 Arabidopsis lyrata scaffold_600382.1 I 0.000
NAC078 Arabidopsis thaliana AT5G04410 D 0.000
NAC053 Arabidopsis thaliana AT3G10500 D 0.000
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.000
Bostr.22252s0010 Boechera stricta Bostr.22252s0010 I 0.000
Bo1g143830 Brassica oleracea Bo1g143830 I 0.000
Bo3g002800 Brassica oleracea Bo3g002800 I 0.000
Bo9g180050 Brassica oleracea Bo9g180050 I 0.000
Bra005804 Brassica rapa Bra005804 I 0.000
Bra009456 Brassica rapa Bra009456 I 0.000
Bra028790 Brassica rapa Bra028790 I 0.000
Bra034120 Brassica rapa Bra034120 I 0.000
PK11467.1 Cannabis sativa PK11467.1 I 0.000
Cagra.9217s0021 Capsella grandiflora Cagra.9217s0021 I 0.000
Cagra.0834s0027 Capsella grandiflora Cagra.0834s0027 I 0.000
Carubv10013370m.g Capsella rubella Carubv10013370m.g I 0.000
Ca_08371 Cicer arietinum Ca_08371 I 0.000
Cla013942 Citrullus lanatus Cla013942 I 0.000
Cla020837 Citrullus lanatus Cla020837 I 0.000
Cla020838 Citrullus lanatus Cla020838 I 0.000
Ciclev10031147m.g Citrus clementina Ciclev10031147m.g I 0.000
orange1.1g007598m.g Citrus sinensis orange1.1g007598m.g I 0.000
Cucsa.186150 Cucumis sativus Cucsa.186150 I 0.000
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.000
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.000
Thhalv10013110m.g Eutrema salsugineum Thhalv10013110m.g I 0.000
Thhalv10020438m.g Eutrema salsugineum Thhalv10020438m.g I 0.000
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.000
GLYMA20G33390 Glycine max GLYMA20G33390 N 0.000
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.000
Lus10028824.g Linum usitatissimum Lus10028824.g N 0.000
Lus10017458.g Linum usitatissimum Lus10017458.g I 0.000
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.000
chr5.CM0909.760.nc Lotus japonicus chr5.CM0909.760.nc N 0.000
MDP0000457996 Malus domestica MDP0000457996 I 0.000
cassava22911.valid.m1 Manihot esculenta cassava22911.valid.m1 I 0.000
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.000
POPTR_0010s23650 Populus trichocarpa POPTR_0010s23650 I 0.000
POPTR_0008s03170 Populus trichocarpa POPTR_0008s03170 I 0.000
Pm017550 Prunus mume Pm017550 I 0.000
PRUPE_ppa003239mg Prunus persica PRUPE_ppa003239mg I 0.000
28872.m000248 Ricinus communis 28872.m000248 I 0.000
SapurV1A.0213s0330 Salix purpurea SapurV1A.0213s0330 I 0.000
SapurV1A.0394s0050 Salix purpurea SapurV1A.0394s0050 I 0.000
TCM_043360 Theobroma cacao TCM_043360 I 0.000