ENSCSAG00000004278 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000004278 T090272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF23
M04527_2.00 		Homo sapiens
DCRMCCATGGCCGCGHCMN
NKGDCGCGGCCATGGKYGH		 SELEX
Yin et al.(2017)
ZNF23_eDBD_HT-SELEX 		0.826 0.995
ZNF23
M04528_2.00 		Homo sapiens
DCHCCCATGGCCGCKMMCN
NGKKMGCGGCCATGGGDGH		 SELEX
Yin et al.(2017)
ZNF23_eDBD_Methyl-HT-SELEX 		0.826 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000000630 C2H2 ZF 185 207
ENSCSAP00000000630 C2H2 ZF 213 235
ENSCSAP00000000630 C2H2 ZF 241 263
ENSCSAP00000000630 C2H2 ZF 269 291
ENSCSAP00000000630 C2H2 ZF 297 319
ENSCSAP00000000630 C2H2 ZF 325 347
ENSCSAP00000000630 C2H2 ZF 353 375
ENSCSAP00000000630 C2H2 ZF 381 403
ENSCSAP00000000630 C2H2 ZF 409 431
ENSCSAP00000000630 C2H2 ZF 437 459
ENSCSAP00000000630 C2H2 ZF 465 487
ENSCSAP00000000630 C2H2 ZF 493 515
ENSCSAP00000000630 C2H2 ZF 521 543
ENSCSAP00000000630 C2H2 ZF 549 571
ENSCSAP00000000630 C2H2 ZF 577 599
ENSCSAP00000000630 C2H2 ZF 605 627

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK13777.1 Cannabis sativa PK13777.1 N
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N
Ca_00041 Cicer arietinum Ca_00041 N
Cucsa.076000 Cucumis sativus Cucsa.076000 N
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N
GLYMA08G13310 Glycine max GLYMA08G13310 N
GLYMA05G30150 Glycine max GLYMA05G30150 N
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N
mgf016294m Mimulus guttatus mgf016294m N
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N
Pm003925 Prunus mume Pm003925 N
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N
30093.m000368 Ricinus communis 30093.m000368 N
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N
TCM_006252 Theobroma cacao TCM_006252 N
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N