CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GJ23192 *(Drosophila virilis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0210294	T116648_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
sna M03670_2.00	Drosophila melanogaster	TRCACCTGTYVB	VBRACAGGTGYA	SELEX Nitta et al.(2015) sna_1	0.825	0.982
sna M05862_2.00	Drosophila melanogaster	NNVCACCTGTYNN	NNRACAGGTGBNN	SMiLE-seq Isakova et al.(2017) Sna	0.825	0.982
sna M06069_2.00	Drosophila melanogaster	SMACYTGYBN	NVRCARGTKS	B1H Zhu et al.(2011) sna_FlyReg_FBgn0003448	0.825	0.982
sna M06070_2.00	Drosophila melanogaster	SCACCTGWYV	BRWCAGGTGS	B1H Zhu et al.(2011) sna_SANGER_10_FBgn0003448	0.825	0.982
sna M06071_2.00	Drosophila melanogaster	MCACCTGTYVHNNN	NNNDBRACAGGTGK	B1H Zhu et al.(2011) sna_SOLEXA_5_FBgn0003448	0.825	0.982
sna M09664_2.00	Drosophila melanogaster	VMACCTGYB	VRCAGGTKB	Misc Kulakovskiy et al.(2009) sna	0.825	0.982
sna M10375_2.00	Drosophila melanogaster	NKRCACCTGTYNB	VNRACAGGTGYMN	Transfac Matys et al.(2006) I$SN_01	0.825	0.982
sna M10376_2.00	Drosophila melanogaster	WSBHADCAVSTKSK	MSMASBTGHTDVSW	Transfac Matys et al.(2006) I$SN_02	0.825	0.982
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Drosophila virilis* TFs

14 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
fgenesh2_pg.9_#_353	Fragilariopsis cylindrus	fgenesh2_pg.9_#_353	N	0.000
estExt_Genewise1Plus.C_70298	Fragilariopsis cylindrus	estExt_Genewise1Plus.C_70298	N	0.000
estExt_fgenesh2_kg.C_130080	Fragilariopsis cylindrus	estExt_fgenesh2_kg.C_130080	N	0.000
MAM_05902	Metarhizium album	MAM_05902	N	0.000
Phatr3_J38097	Phaeodactylum tricornutum	Phatr3_J38097	N	0.000
Phatr3_J50240	Phaeodactylum tricornutum	Phatr3_J50240	N	0.000
Phatr3_J49938	Phaeodactylum tricornutum	Phatr3_J49938	N	0.000
Phatr3_J47350	Phaeodactylum tricornutum	Phatr3_J47350	N	0.000
Phatr3_J42576	Phaeodactylum tricornutum	Phatr3_J42576	N	0.000
Phatr3_J39045	Phaeodactylum tricornutum	Phatr3_J39045	N	0.000
S40285_05706	Stachybotrys chlorohalonata	S40285_05706	N	0.000
Thaps10099	Thalassiosira pseudonana	Thaps10099	N	0.000
Thaps11168	Thalassiosira pseudonana	Thaps11168	N	0.000
Thaps22372	Thalassiosira pseudonana	Thaps22372	N	0.000
Thaps22889	Thalassiosira pseudonana	Thaps22889	N	0.000
Thaps4075	Thalassiosira pseudonana	Thaps4075	N	0.000
Thaps4076	Thalassiosira pseudonana	Thaps4076	N	0.000
Thaps5285	Thalassiosira pseudonana	Thaps5285	N	0.000
Thapsdraft651	Thalassiosira pseudonana	Thapsdraft651	N	0.000