TCM_006252 (Theobroma cacao)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TCM_006252 T130170_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX97163 C2H2 ZF 77 101
EOX97163 C2H2 ZF 106 130
EOX97163 C2H2 ZF 136 160
EOX97163 C2H2 ZF 166 191
EOX97163 C2H2 ZF 229 254
EOX97164 C2H2 ZF 53 77
EOX97164 C2H2 ZF 82 106
EOX97164 C2H2 ZF 112 136
EOX97164 C2H2 ZF 142 167
EOX97164 C2H2 ZF 205 230
EOX97165 C2H2 ZF 37 61
EOX97165 C2H2 ZF 66 90
EOX97165 C2H2 ZF 96 120
EOX97165 C2H2 ZF 126 151
EOX97165 C2H2 ZF 189 214

Links

Other C2H2 ZF family TFs
Other Theobroma cacao TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK13777.1 Cannabis sativa PK13777.1 N 0.794
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.796
Ca_00041 Cicer arietinum Ca_00041 N 0.804
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.799
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.806
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.796
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.796
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.818
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.794
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.786
mgf016294m Mimulus guttatus mgf016294m N 0.772
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.806
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.811
Pm003925 Prunus mume Pm003925 N 0.802
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.802
30093.m000368 Ricinus communis 30093.m000368 N 0.794
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.806
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.815
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.815
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.804