VIT_12s0035g00660 (Vitis vinifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VIT_12s0035g00660 T131475_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_12s0035g00660.t01 C2H2 ZF 77 101
VIT_12s0035g00660.t01 C2H2 ZF 106 130
VIT_12s0035g00660.t01 C2H2 ZF 136 160
VIT_12s0035g00660.t01 C2H2 ZF 166 191
VIT_12s0035g00660.t01 C2H2 ZF 228 253

Links

Other C2H2 ZF family TFs
Other Vitis vinifera TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK13777.1 Cannabis sativa PK13777.1 N 0.803
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.806
Ca_00041 Cicer arietinum Ca_00041 N 0.810
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.808
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.811
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.802
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.802
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.804
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.800
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.792
mgf016294m Mimulus guttatus mgf016294m N 0.782
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.811
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.802
Pm003925 Prunus mume Pm003925 N 0.802
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.802
30093.m000368 Ricinus communis 30093.m000368 N 0.803
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.811
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.802
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.802
TCM_006252 Theobroma cacao TCM_006252 N 0.804