CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava13878.valid.m1
(
Manihot esculenta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
cassava13878.valid.m1
T137819_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava13878.valid.m1
C2H2 ZF
77
101
FLCSYEGCGKTFIDAGALRKHSHIH
cassava13878.valid.m1
C2H2 ZF
106
130
YVCHYEGCGKKFLDSSKLKRHFLIH
cassava13878.valid.m1
C2H2 ZF
136
160
FVCPHEGCGKAFSLDFNLRSHMKTH
cassava13878.valid.m1
C2H2 ZF
166
191
HICPYPECGKRYAHDYKLKNHIAAHH
cassava13878.valid.m1
C2H2 ZF
229
254
YACPYEGCIKAYIHEYKLKLHLRKEH
Links
Other
C2H2 ZF
family TFs
Other
Manihot esculenta
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy