estExt_fgenesh2_pg.C_10050002 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_10050002 T138571_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_10050002 C2H2 ZF 3 26

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14744 Aegilops tauschii F775_14744 I
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I
MYB58 Arabidopsis thaliana AT1G16490 D
ATMYB63 Arabidopsis thaliana AT1G79180 D
MYB14 Arabidopsis thaliana AT2G31180 I
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I
Bo3g025100 Brassica oleracea Bo3g025100 I
Bo4g176020 Brassica oleracea Bo4g176020 I
Bo4g176030 Brassica oleracea Bo4g176030 I
Bo6g081140 Brassica oleracea Bo6g081140 I
Bo6g122640 Brassica oleracea Bo6g122640 I
Bo8g105490 Brassica oleracea Bo8g105490 I
Bra003619 Brassica rapa Bra003619 I
Bra018267 Brassica rapa Bra018267 I
Bra021708 Brassica rapa Bra021708 I
Bra026720 Brassica rapa Bra026720 I
PK03488.1 Cannabis sativa PK03488.1 I
PK24260.1 Cannabis sativa PK24260.1 N
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I
Carubv10011190m.g Capsella rubella Carubv10011190m.g I
Carubv10020691m.g Capsella rubella Carubv10020691m.g I
Carubv10023905m.g Capsella rubella Carubv10023905m.g I
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I
Cucsa.053600 Cucumis sativus Cucsa.053600 I
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I
GLYMA01G06192 Glycine max GLYMA01G06192 I
GLYMA03G31980 Glycine max GLYMA03G31980 I
GLYMA06G45520 Glycine max GLYMA06G45520 N
GLYMA06G45531 Glycine max GLYMA06G45531 N
GLYMA06G45554 Glycine max GLYMA06G45554 I
GLYMA12G11330 Glycine max GLYMA12G11330 I
GLYMA12G11490 Glycine max GLYMA12G11490 N
GLYMA12G32530 Glycine max GLYMA12G32530 I
GLYMA13G37903 Glycine max GLYMA13G37903 I
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I
MLOC_71418 Hordeum vulgare MLOC_71418 I
LPERR02G23410 Leersia perrieri LPERR02G23410 I
Lus10018518.g Linum usitatissimum Lus10018518.g N
Lus10021185.g Linum usitatissimum Lus10021185.g I
Lus10022021.g Linum usitatissimum Lus10022021.g I
Lus10033737.g Linum usitatissimum Lus10033737.g N
Lus10039734.g Linum usitatissimum Lus10039734.g I
Lus10039735.g Linum usitatissimum Lus10039735.g I
Lus10041145.g Linum usitatissimum Lus10041145.g I
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N
MDP0000155426 Malus domestica MDP0000155426 I
MDP0000407613 Malus domestica MDP0000407613 N
cassava25784.m1 Manihot esculenta cassava25784.m1 I
cassava26895.m1 Manihot esculenta cassava26895.m1 N
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I
MTR_2g067420 Medicago truncatula MTR_2g067420 I
mgf018684m Mimulus guttatus mgf018684m N
mgf019234m Mimulus guttatus mgf019234m N
mgf022141m Mimulus guttatus mgf022141m N
mgf022158m Mimulus guttatus mgf022158m N
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I
OBART02G28790 Oryza barthii OBART02G28790 I
OBART04G23680 Oryza barthii OBART04G23680 I
OB0039G10010 Oryza brachyantha OB0039G10010 I
OB02G35920 Oryza brachyantha OB02G35920 I
OB04G30570 Oryza brachyantha OB04G30570 I
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I
BGIOSGA005798 Oryza indica BGIOSGA005798 I
BGIOSGA014440 Oryza indica BGIOSGA014440 I
BGIOSGA031688 Oryza indica BGIOSGA031688 I
OLONG_022853 Oryza longistaminata OLONG_022853 I
OMERI02G27850 Oryza meridionalis OMERI02G27850 I
OMERI04G19570 Oryza meridionalis OMERI04G19570 I
ONIVA02G31530 Oryza nivara ONIVA02G31530 I
ONIVA04G19740 Oryza nivara ONIVA04G19740 I
OPUNC02G26430 Oryza punctata OPUNC02G26430 I
OPUNC04G21230 Oryza punctata OPUNC04G21230 I
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I
OS02G0695200 Oryza sativa OS02G0695200 I
OS04G0594100 Oryza sativa OS04G0594100 I
OS10G0478300 Oryza sativa OS10G0478300 I
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N
Pm015302 Prunus mume Pm015302 N
Pm015303 Prunus mume Pm015303 I
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
Si010384m.g Setaria italica Si010384m.g I
Si010814m.g Setaria italica Si010814m.g I
Sb04g026480 Sorghum bicolor Sb04g026480 I
Sb04g031110 Sorghum bicolor Sb04g031110 I
Sb06g027180 Sorghum bicolor Sb06g027180 I
TCM_007865 Theobroma cacao TCM_007865 I
TCM_007868 Theobroma cacao TCM_007868 I
TCM_020889 Theobroma cacao TCM_020889 I
TCM_026197 Theobroma cacao TCM_026197 I
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I
TRIUR3_14330 Triticum urartu TRIUR3_14330 I
TRIUR3_31731 Triticum urartu TRIUR3_31731 I
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I