CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig131.frz3.gene12
(
Meloidogyne hapla
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
MhA1_Contig131.frz3.gene12
T169901_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig131.frz3.gene12
DM
189
234
KKYFCQRCLNHKEEHPRKGHKPFCRYRDCQCVECQMVEKRRRLNNA
MhA1_Contig131.frz3.gene12
DM
259
306
RNPMCARCTAHGKESALRGHKKAVCPFRICECEKCGLVEERRRLMAAQ
Links
Other
DM
family TFs
Other
Meloidogyne hapla
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK13777.1
Cannabis sativa
PK13777.1
N
evm.TU.supercontig_161.1
Carica papaya
evm.TU.supercontig_161.1
N
Ca_00041
Cicer arietinum
Ca_00041
N
Cucsa.076000
Cucumis sativus
Cucsa.076000
N
Eucgr.G00356
Eucalyptus grandis
Eucgr.G00356
N
GLYMA08G13310
Glycine max
GLYMA08G13310
N
GLYMA05G30150
Glycine max
GLYMA05G30150
N
Gorai.002G214700
Gossypium raimondii
Gorai.002G214700
N
LjT40J14.40.nc
Lotus japonicus
LjT40J14.40.nc
N
cassava13878.valid.m1
Manihot esculenta
cassava13878.valid.m1
N
mgf016294m
Mimulus guttatus
mgf016294m
N
POPTR_0022s00900
Populus trichocarpa
POPTR_0022s00900
N
POPTR_0004s23050
Populus trichocarpa
POPTR_0004s23050
N
PRUPE_ppa007287mg
Prunus persica
PRUPE_ppa007287mg
N
30093.m000368
Ricinus communis
30093.m000368
N
SapurV1A.0136s0510
Salix purpurea
SapurV1A.0136s0510
N
SapurV1A.0470s0060
Salix purpurea
SapurV1A.0470s0060
N
SapurV1A.0618s0010
Salix purpurea
SapurV1A.0618s0010
N
TCM_006252
Theobroma cacao
TCM_006252
N
VIT_12s0035g00660
Vitis vinifera
VIT_12s0035g00660
N