GSMUA_Achr3G31720_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr3G31720_001 T193602_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.867 0.972
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.867 0.972
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.867 0.972
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.944
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.847 0.861
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.847 0.861
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.838 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P31720_001 GATA 203 238

Links

Other GATA family TFs
Other Musa acuminata TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I
AT2G42280 Arabidopsis thaliana AT2G42280 D
BHLH122 Arabidopsis thaliana AT1G51140 D
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I
Bo4g015860 Brassica oleracea Bo4g015860 I
Bo4g191390 Brassica oleracea Bo4g191390 I
Bo6g024810 Brassica oleracea Bo6g024810 I
Bra004678 Brassica rapa Bra004678 I
Bra016886 Brassica rapa Bra016886 I
Bra018896 Brassica rapa Bra018896 I
PK20089.1 Cannabis sativa PK20089.1 I
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I
Carubv10009458m.g Capsella rubella Carubv10009458m.g I
Carubv10023498m.g Capsella rubella Carubv10023498m.g I
Ca_02662 Cicer arietinum Ca_02662 I
Ca_07284 Cicer arietinum Ca_07284 I
Ca_14223 Cicer arietinum Ca_14223 I
Cla006394 Citrullus lanatus Cla006394 I
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I
Cucsa.143260 Cucumis sativus Cucsa.143260 I
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I
GLYMA15G03740 Glycine max GLYMA15G03740 I
GLYMA13G41670 Glycine max GLYMA13G41670 I
GLYMA11G13960 Glycine max GLYMA11G13960 I
GLYMA12G05930 Glycine max GLYMA12G05930 I
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I
MLOC_30102 Hordeum vulgare MLOC_30102 I
MLOC_12058 Hordeum vulgare MLOC_12058 I
LPERR09G10800 Leersia perrieri LPERR09G10800 I
LPERR08G16800 Leersia perrieri LPERR08G16800 I
LPERR04G13560 Leersia perrieri LPERR04G13560 I
MDP0000307685 Malus domestica MDP0000307685 I
MTR_7g092540 Medicago truncatula MTR_7g092540 I
MTR_4g065870 Medicago truncatula MTR_4g065870 I
MTR_2g098310 Medicago truncatula MTR_2g098310 I
MTR_1g052470 Medicago truncatula MTR_1g052470 I
mgf016092m Mimulus guttatus mgf016092m I
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I
OBART04G16900 Oryza barthii OBART04G16900 I
OB04G24170 Oryza brachyantha OB04G24170 I
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I
BGIOSGA016651 Oryza indica BGIOSGA016651 I
OMERI04G14260 Oryza meridionalis OMERI04G14260 I
ONIVA04G15000 Oryza nivara ONIVA04G15000 I
OPUNC04G14700 Oryza punctata OPUNC04G14700 I
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I
OS04G0489600 Oryza sativa OS04G0489600 I
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I
Pavir.J00377 Panicum virgatum Pavir.J00377 I
Pavir.J14004 Panicum virgatum Pavir.J14004 I
Pavir.J25484 Panicum virgatum Pavir.J25484 I
estExt_fgenesh1_pg.C_2130035 Physcomitrella patens estExt_fgenesh1_pg.C_2130035 N
e_gw1.83.237.1 Physcomitrella patens e_gw1.83.237.1 I
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I
30169.m006403 Ricinus communis 30169.m006403 I
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I
Si030166m.g Setaria italica Si030166m.g I
Si029614m.g Setaria italica Si029614m.g I
Si013950m.g Setaria italica Si013950m.g I
Sb07g027810 Sorghum bicolor Sb07g027810 I
Sb02g028300 Sorghum bicolor Sb02g028300 I
TCM_040564 Theobroma cacao TCM_040564 I
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I
GRMZM5G879527 Zea mays GRMZM5G879527 N
GRMZM2G417597 Zea mays GRMZM2G417597 I
GRMZM2G153454 Zea mays GRMZM2G153454 I
GRMZM2G142932 Zea mays GRMZM2G142932 I
GRMZM2G085467 Zea mays GRMZM2G085467 I